Search Results for "align"

...The system uses a combination of convolutional neural networks and recurrent neural networks to extract visual features and model sequential character patterns in handwriting. It also employs connectionist temporal classification (CTC) to align predicted character sequences with input images without requiring character-level segmentation. The repository provides code for training models, performing inference on handwritten text images, and evaluating recognition accuracy. SimpleHTR is commonly used as an educational example for understanding how modern handwriting recognition systems operate.

FineSplice is a Python wrapper to TopHat2 geared towards a reliable identification of expressed exon junctions from RNA-Seq data, at enhanced detection precision with small loss in sensitivity. Following alignment with TopHat2 using known transcript annotations, FineSplice takes as input the resulting BAM file and outputs a confident set of expressed splice junctions with the corresponding read counts. Potential false positives arising from spurious alignments are filtered out via a...