Showing 94 open source projects for "libhamlib-4"

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  • 1
    Adaptive Gaussian Filtering

    Adaptive Gaussian Filtering

    Machine learning with Gaussian kernels.

    Libagf is a machine learning library that includes adaptive kernel density estimators using Gaussian kernels and k-nearest neighbours. Operations include statistical classification, interpolation/non-linear regression and pdf estimation. For statistical classification there is a borders training feature for creating fast and general pre-trained models that nonetheless return the conditional probabilities. Libagf also includes clustering algorithms as well as comparison and validation...
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  • 2

    SuRankCo

    Supervised Ranking of Contigs in de novo Assemblies

    SuRankCo is a machine learning based software to score and rank contigs from de novo assemblies of next generation sequencing data. It trains with alignments of contigs with known reference genomes and predicts scores and ranking for contigs which have no related reference genome yet. For more details about SuRankCo and its functioning, please see "SuRankCo: Supervised Ranking of Contigs in de novo Assemblies" Mathias Kuhring, Piotr Wojtek Dabrowski, Andreas Nitsche and Bernhard Y....
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  • 3
    IMAGINE

    IMAGINE

    Biological image viewer and processor

    Detection, enumeration, and sizing of biological organisms by image analysis.
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  • 4

    Automatic cell lineage reconstruction

    Automatic segmentation and tracking for 3D time-lapse microscopy

    ...We present an open-source computational framework for segmentation and tracking of cell nuclei with high accuracy and speed. We demonstrate its (1) generality, by reconstructing cell lineages in four-dimensional, terabyte-sized image data of fruit-fly, zebrafish and mouse embryos, acquired with three different types of fluorescence microscopes, (2) scalability, by analyzing advanced stages of development with up to 20,000 cells per time point, at 26,000 cells min-1 on a single computer workstation, and (3) ease of use, by adjusting only two parameters across all data sets and providing visualization and editing tools for efficient data curation. ...
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  • 5
    Intelligent Keyword Miner

    Intelligent Keyword Miner

    Intelligent SEO keyword miner and predicing tool

    THIS IS A NETBEANS 8.02 PROJECT ENGLISH ONLY This program was made to help me with the patent research. It simply generates the search keywords, based on your upvotes or a downvotes of the input parameters. It can accept a text or URL (text takes a prescedence over the URL). If you input URL, it goes to a page, and learns its text from HTML format. This program is intelligent as it predicts what you may want to search next, based on your personal trends. After searching the...
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  • 6

    Chordalysis

    Log-linear analysis (data modelling) for high-dimensional data

    ===== Project moved to https://github.com/fpetitjean/Chordalysis ===== Log-linear analysis is the statistical method used to capture multi-way relationships between variables. However, due to its exponential nature, previous approaches did not allow scale-up to more than a dozen variables. We present here Chordalysis, a log-linear analysis method for big data. Chordalysis exploits recent discoveries in graph theory by representing complex models as compositions of triangular structures,...
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  • 7

    KMeansAniX

    Animation of kmeans clustering using X Window System

    Open source animation of kmeans clustering in X Window System using the C++ libplotter library. Supports Linux, Mac, and BSD. Includes common initialization methods such as Forgy, Macqueen, random, and angular. Sample videos are available through the Files Tab above. The SVN repo is accessible thorugh the Code Tab above. Requires a C++ compiler, libplot-dev, and libncurses5-dev Mac alternative to libplot-dev: macports plotutils +x11
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  • 8
    Marsyas (Music Analysis, Retrieval and Synthesis for Audio Signals) is a framework for developing systems for audio processing. It provides an general architecture for connecting audio, soundfiles, signal processing blocks and machine learning. Source code at SF is outdated! Marsyas is now hosted at GitHub: https://github.com/marsyas/marsyas Downloads are now provided at Bintray: https://bintray.com/marsyas
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  • 9

    ANNFiD

    A forensic file identification tool using neural networks

    Just carved a bunch of bytes and have no idea what they could be? Maybe ANNFiD can help. ANNFiD uses neural network to identify byte patterns. It can be trained and has a GUI to help in the process. The tool is still on a very early stage, but could improve exponentially with the help of the developer community
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  • 10

    EducationalLCS

    eLCS - Educational Learning Classifier System

    Educational Learning Classifier System (eLCS) is a set of learning classifier system (LCS) educational demos designed to introduce students or researchers to the basics of a modern Michigan-style LCS algorithm. This eLCS package includes 5 different implementations of a basic LCS algorithm, as part of a 6 stage set of demos that will be paired with the first introductory LCS textbook. Each eLCS implementations (from demo 2 up to demo 6) progressively add major components of the entire...
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  • 11
    C-IL2P

    C-IL2P

    Original C-IL2P

    This is a C++ implementation of the original C-IL2P system, invented by Artur D'Avila Garcez and Gerson Zaverucha. C-IL2P is a neural-symbolic learning system which uses a propositional logic program to create a three-layer recursive neural network and uses back-propagation to learn from examples.
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  • 12

    ProximityForest

    Efficient Approximate Nearest Neighbors for General Metric Spaces

    A proximity forest is a data structure that allows for efficient computation of approximate nearest neighbors of arbitrary data elements in a metric space. See: O'Hara and Draper, "Are You Using the Right Approximate Nearest Neighbor Algorithm?", WACV 2013 (best student paper award). One application of a ProximityForest is given in the following CVPR publication: Stephen O'Hara and Bruce A. Draper, "Scalable Action Recognition with a Subspace Forest," IEEE Conference on Computer...
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  • 13
    Consilium Sentence Suggestions Tools

    Consilium Sentence Suggestions Tools

    Consilium – User Defined sentence Suggestion Tool.

    There are many tools available in market which will provide spell correction or grammer correction while making documents, but very few tools are available which are providing sentence completion according to previously entered text. But this all are providing sentence complition suggestion for sentences which are oftenly or regularly used by all people in same manner. But in reality style of writing changes person to person. While our aim is to provide a sentence suggestion tool which...
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  • 14
    This project develops a simple, fast and easy to use Python graph library using NumPy, Scipy and PySparse.
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  • 15
    Java application for training and deploying text processing applications such as part-of-speech taggers, based on a re-implementation of Brill's algorithm in Java.
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  • 16
    iGREAT is an open-source, statistical machine translation software toolkit based on finite-state models.
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  • 17
    BreakDancer-0.0.1 is a Perl package that provides genome-wide detection of structural variants from next generation paired-end sequencing reads.
    Downloads: 1 This Week
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  • 18
    The Information Extraction Plugin allows the use of information extraction techniques within RapidMiner. It can be seen as an interface between natural language and IE- or datamining-methods, by extracting interesting information out of documents.
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  • 19
    SimpleAiBot

    SimpleAiBot

    A simple chat bot project for educational purposes! (OS X Only)

    SimpleAiBot is created for educational purposes but it can grow out to something much bigger, however still educational. This project exists so other people can actually look at the code of a working chat bot and learn from it or even improve SimpleAiBot! If you're looking for this: this is it! Also don't hesitate to join and improve SimpleAiBot, better make your changes public and usable to everyone then experimenting on your own. PS: More experienced AI developers are also welcome to...
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  • 20

    ABC-DynF

    Adaptive Bayesian Classifier with Dynamic Features

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  • 21

    AdPreqFr4SL

    Adaptive Prequential Learning Framework

    The AdPreqFr4SL learning framework for Bayesian Network Classifiers is designed to handle the cost / performance trade-off and cope with concept drift. Our strategy for incorporating new data is based on bias management and gradual adaptation. Starting with the simple Naive Bayes, we scale up the complexity by gradually updating attributes and structure. Since updating the structure is a costly task, we use new data to primarily adapt the parameters and only if this is really necessary, do we...
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  • 22

    cognity

    A neural network library for Java.

    Cognity is an object-oriented neural network library for Java. It's goal is to provide easy-to-use, high level architecture for neural network computations along with reasonable performance.
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  • 23
    pyIRDG

    pyIRDG

    IMDb Relational Dataset Generator

    ...It uses data from the Internet Movie Database in combination with IMDbPY as backend. A graphical user interface written in pyQt allows the user to link multiple entities together as model for the generation process. The big four entities are Title, Person, Company and Character. Many attributes can be chosen for adding to the output .pl file. Three types of constraints on attributes are available to limit the output: an availability constraint, a range constraint and a value constraint. It works with both MySQL and PostgreSQL as database backend.
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  • 24
    This Java software implements Profile Hidden Markov Models (PHMMs) for protein classification for the WEKA workbench. Standard PHMMs and newly introduced binary PHMMs are used. In addition the software allows propositionalisation of PHMMs.
    Downloads: 0 This Week
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  • 25
    Nen

    Nen

    neural network implementation in java

    3-layer neural network for regression and classification with sigmoid activation function and command line interface similar to LibSVM. Quick Start: "java -jar nen.jar"
    Downloads: 0 This Week
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