Showing 1153 open source projects for "open source project"

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  • 1

    MCTIMME

    Microbial Counts Trajectories Infinite Mixture Model Engine

    MCTIMME is a nonparametric Bayesian computational framework for analyzing microbial time-series data.The current implementation is in Matlab.
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  • 2
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  • 3
    A C# library for use in image processing and computer vision research.
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  • 4
    iGREAT is an open-source, statistical machine translation software toolkit based on finite-state models.
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  • 5
    DocCO

    DocCO

    Non-disjoint groupping of Documents based on word sequence approach

    This is a GUI for learning non disjoint groups of documents based on Weka machine learning framework. It offers the possibility to make non disjoint clustering of documents using both vectorial and sequential representation (word sequence approach based on WSK kernel). All data format supported by WEKA could be used in DocCO. Data could be loaded from files, from databases or from specified URL. All the preprocessing techniques implemented in WEKA could be used before performing the learning.
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  • 6
    ECOC PAK is a C++ Library for the Error Correcting Output Codes classification framework. It supports several coding and decoding strategies as well as several classifiers.
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  • 7
    GSGP
    GS-GP is a free/open source C++ library that provides a robust and efficient implementation of geometric semantic genetic operators for Genetic Programming.
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  • 8
    jFAN2 project develops a Java API to use a neural network (neuro-fuzzy) called FAN (Free Associative Neurons). Its an reprogramed version of jFAN "https://sourceforge.net/projects/jfan/".
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  • 9
    feed4weka is an open library that enriches weka (http://www.cs.waikato.ac.nz/ml/weka/), an open source project for data analysis. It integrates new classification and clustering algorithms, and adds the coclustering and outlier detection frameworks
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  • 10

    Reactor Breeder

    A Genetic Algorithm for Reactors in StarMade

    This software uses a genetic algorithm to "evolve" reactor designs for Schema's space-simulation game, Star-Made (http://star-made.org/). One of the more unique aspects of the game is that ship power management is not as simple as filling a cube with power generation blocks. This mechanism leads to difficulties in getting maximal power generation out of such reactors. This program rectifies this issue by using a self-organizing variant of brute force search. Much of the search space is...
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  • 11
    A High-Order Multi-Variate Approximation Scheme for Arbitrary Data Sets, C implementation of the method described in http://web.mit.edu/qiqi/www/paper/interpolation.pdf, with Python and Fortran interfaces.
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  • 12
    MyNook

    MyNook

    A machine learning system for supervised document classification

    An open source system for supervised document classification based on statistical machine learning techniques. On the contrary of the state of art classification techniques, MyNook just requires the title of the document, not the content itself.
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  • 13
    BreakDancer-0.0.1 is a Perl package that provides genome-wide detection of structural variants from next generation paired-end sequencing reads.
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  • 14
    The Information Extraction Plugin allows the use of information extraction techniques within RapidMiner. It can be seen as an interface between natural language and IE- or datamining-methods, by extracting interesting information out of documents.
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  • 15
    pySTEP or Python Strongly Typed gEnetic Programming: A light Genetic Programming API that allows the user to easily evolve populations of trees with precise grammatical and structural constraints.
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  • 16

    Large Scale Optimization Templates

    C++ templates with generic nonlinear optimization algorithms

    Highly tunable, simple to use collection of the templates, containing a set of classes for solving unconstrained large scale nonlinear optimization problems. Currently it contains: -- Limited Memory Quasi Newton (L-BFSG) -- BFSG -- Conjugate Gradient -- Gradient Descent -- Wolf condition Line Search -- Backtracking Line Search -- Exact Golden Search -- Golden Search with Wolf condition We also distribute a set of tests with the library.
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  • 17
    We moved to GitHub: https://github.com/grobid/grobid
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  • 18

    AdPreqFr4SL

    Adaptive Prequential Learning Framework

    The AdPreqFr4SL learning framework for Bayesian Network Classifiers is designed to handle the cost / performance trade-off and cope with concept drift. Our strategy for incorporating new data is based on bias management and gradual adaptation. Starting with the simple Naive Bayes, we scale up the complexity by gradually updating attributes and structure. Since updating the structure is a costly task, we use new data to primarily adapt the parameters and only if this is really necessary, do we...
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  • 19
    This is a Matlab software package for single molecule FRET data analysis.
    Downloads: 7 This Week
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  • 20

    ABC-DynF

    Adaptive Bayesian Classifier with Dynamic Features

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  • 21
    TreeLiker

    TreeLiker

    TreeLiker is a collection of fast algorithms for working with complex

    TreeLiker is a collection of fast algorithms for working with complex structured data in relational form. The data can, for example, describe large organic molecules such as proteins or groups of individuals such as social networks or predator-prey networks etc. The algorithms included in TreeLiker are unique in that, in principle, they are able to search given sets of relational patterns exhaustively, thus guaranteeing that if some good pattern capturing an important feature of the problem...
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  • 22

    Black Hole Cortex

    Sphere surface layers of visual cortex approach maximum info density

    Near the surface (even horizon) of a black hole, there is maximum information density in units of squared plancks (and some translation to qubits). Similarly, our imagination is the set of all possible things we can draw onto our most dense layer of visual cortex in electricity patterns. Bigger layers have more neurons to handle those possibilities. A Black Hole Cortex is a kind of visual cortex that has density of neuron layers similar to density at various radius from a black hole. What we...
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  • 23
    The AK toolkit is another kit for building and use Hidden Markov Models (HMMs). Originally developed for handwritten text recognition (HTR) using Bernoulli HMMs, it also implements diagonal Gaussians and can be used for any other purpose.
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  • 24

    NeuralGas

    Self-organized learning

    A collection of algorithms based on the topology preserving Neural Gas algorithm for density estimation/quantization/clustering/self-organized learning. I moved this project to GitHub: https://github.com/sergioroa/neuralgas
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  • 25

    JaCHMM

    Java Conditioned Hidden Markov Model library

    The JaCHMM - the Java Conditioned Hidden Markov Model library - is a complete implementation of a CHMM in Java ready to use either on command line or as a module. The JaCHMM is licenced under the BSD licence. It gives an implementation of the Viterbi, Forward-Backward, Baum-Welch and K-Means algorithms, all adapted for the CHMM. JaCHMM is based on the JaHMM and also designed to achieve reasonable performance without making the code unreadable. Consequently, it offers a good way of...
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