Search Results for "open source assembly software source code" - Page 18
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Showing 520 open source projects for "open source assembly software source code"
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Neural Photo Editor
A simple interface for editing natural photos
Neural Photo Editor is an experimental machine learning application that demonstrates how generative neural networks can be used as an interactive photo editing tool. The project implements the system described in the research paper Neural Photo Editing with Introspective Adversarial Networks, which introduces a generative model capable of modifying images in semantically meaningful ways. Instead of editing images by directly manipulating pixels, the software allows users to influence... -
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TEES
Turku Event Extraction System
Turku Event Extraction System (TEES) is a free and open source natural language processing system developed for the extraction of events and relations from biomedical text. It is written mostly in Python, and should work in generic Unix/Linux environments. Currently, the TEES source code repository still remains on GitHub at http://jbjorne.github.com/TEES/ where there is also a wiki with more information. -
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nunn
This is an implementation of a machine learning library in C++17
nunn is a collection of ML algorithms and related examples written in modern C++17. -
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JCLTP
A Java Class Library for Text Processing
JCLTP is a class library designed for processing text. JCLTP is free, open source and developed with the Java programming language. JCLTP is distributed under the GNU license. It incorporates several technologies that enable process information while applying AI techniques, in order to build predictive models for text classification. Through a flexible structure of interfaces and classes, the opportunity to extend, adapt and add functionality JCLTP is provided. Thus, analysis of new types... -
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Python Machine Learning book
The book code repository and info resource
What you can expect are 400 pages rich in useful material just about everything you need to know to get started with machine learning. From theory to the actual code that you can directly put into action! This is not yet just another "this is how scikit-learn works" book. I aim to explain all the underlying concepts, tell you everything you need to know in terms of best practices and caveats, and we will put those concepts into action mainly using NumPy, scikit-learn, and Theano. This is not... -
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Spark Python Notebooks
Apache Spark & Python (pySpark) tutorials for Big Data Analysis
Spark Python Notebooks is a curated collection of example Jupyter notebooks designed to help developers and data engineers learn Apache Spark using Python in an interactive environment. Rather than only providing static code files, this project uses notebooks to teach practical data processing workflows, exposing users to real Spark programming patterns like working with RDDs, DataFrames, and distributed computations. These notebooks often demonstrate how to transform, analyze, and visualize... -
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Density-ratio based clustering
Discovering clusters with varying densities
This site provides the source code of two approaches for density-ratio based clustering, used for discovering clusters with varying densities. One approach is to modify a density-based clustering algorithm to do density-ratio based clustering by using its density estimator to compute density-ratio. The other approach involves rescaling the given dataset only. An existing density-based clustering algorithm, which is applied to the rescaled dataset, can find all clusters with varying... -
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Mass-based dissimilarity
A data dependent dissimilarity measure based on mass estimation.
This software calculates the mass-based dissimilarity matrix for data mining algorithms relying on a distance measure. References: Overcoming Key Weaknesses of Distance-based Neighbourhood Methods using a Data Dependent Dissimilarity Measure. KDD 2016 http://dx.doi.org/10.1145/2939672.2939779 The source code, presentation slide and poster are attached under "Files". -
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Apache PredictionIO
Machine learning server for developers and ML engineers
Apache PredictionIO® is an open source Machine Learning Server built on top of a state-of-the-art open source stack for developers and data scientists to create predictive engines for any machine learning task. Quickly build and deploy an engine as a web service on production with customizable templates; respond to dynamic queries in real-time once deployed as a web service; evaluate and tune multiple engine variants systematically; unify data from multiple platforms in batch or in real-time... -
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JCLAL
A Java Class Library for Active Learning
JCLAL is a general purpose framework developed in Java for the active learning research area. JCLAL framework is open source software and it is distributed under the GNU general public license. It is constructed with a high-level software environment, with a strong object oriented design and use of design patterns, which allow to the developers reuse, modify and extend the framework. If you want to refer to JCLAL in a publication, please cite the following JMLR paper. ... -
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Convolution arithmetic
A technical report on convolution arithmetic in deep learning
A technical report on convolution arithmetic in the context of deep learning. The code and the images of this tutorial are free to use as regulated by the licence and subject to proper attribution. The animations will be output to the gif directory. Individual animation steps will be output in PDF format to the pdf directory and in PNG format to the png directory. We introduce a guide to help deep learning practitioners understand and manipulate convolutional neural network architectures.... -
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BPL
Bayesian Program Learning model for one-shot learning
BPL (Bayesian Program Learning) is a MATLAB implementation of the Bayesian Program Learning framework for one-shot concept learning (especially on handwritten characters). The approach treats each concept (e.g. a character) as being generated by a probabilistic program (motor primitives, strokes, spatial relationships), and inference proceeds by fitting those generative programs to a single example, generalizing to new examples, and generating new exemplars. The repository contains code for... -
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libcrn is document image processing library written in C++11 for Linux, Windows, Mac OsX and Google Android. It is a toolbox that allows to create easily software such as OCRs and layout analysis tools.
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This site contains four packages of Mass and mass-based density estimation. 1. The first package is about the basic mass estimation (including one-dimensional mass estimation and Half-Space Tree based multi-dimensional mass estimation). This packages contains the necessary codes to run on MATLAB. 2. The second package includes source and object files of DEMass-DBSCAN to be used with the WEKA system. 3. The third package DEMassBayes includes the source and object files of a Bayesian...
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HYBRYD
Library written in C with Python API for IPv6 networking
This project is a rewritten of an initial project that I've called GLUE and created in 2005. I'm trying to readapt it for Python 2.7.3 and GCC 4.6.3 The library has to be build as a simple Python extension using >python setup.py install and allows to create different kind of servers, clients or hybryds (clients-servers) over (TCP/UDP) using the Ipv6 Protocol. The architecture of the code is based on brain architecture. Will put an IPv6 adress active available as soon as... -
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GUAJE FUZZY
Free software for generating understandable and accurate fuzzy systems
GUAJE stands for Generating Understandable and Accurate fuzzy models in a Java Environment. Thus, it is a free software tool (licensed under GPL-v3) with the aim of supporting the design of interpretable and accurate fuzzy systems by means of combining several preexisting open source tools, taking profit from the main advantages of all of them. It is a user-friendly portable tool designed and developed in order to make easier knowledge extraction and representation for fuzzy systems, paying special attention to interpretability issues. ... -
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JCLALwebservice
Web service for JCLAL
This work is part of the area of Artificial Intelligence, in particular in the field of machine learning. The web service is built to facilitate the use of JCLAL in applications developed in any programming language. Users should know only the basic format to send and receive requests. -
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JCLALtext
Text processing module for JCLAL
JCLALtext is a class library designed to extend the framework JCLAL text tasks. JCLALtext is free, open source and developed with the Java programming language. JCLALtext is distributed under the GNU license. The researcher can use the class library by adding it to your project. -
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AlgoWiki
Repository which contains links and resources on different topics
AlgoWiki is an open educational repository that aggregates a large collection of curated resources covering many areas of computer science, programming, and algorithmic problem solving. The project functions as a structured knowledge index that links to tutorials, articles, courses, and research materials across numerous technical domains. Topics include algorithms, machine learning, artificial intelligence, programming languages, web development, and software engineering practices. The... -
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SuRankCo
Supervised Ranking of Contigs in de novo Assemblies
SuRankCo is a machine learning based software to score and rank contigs from de novo assemblies of next generation sequencing data. It trains with alignments of contigs with known reference genomes and predicts scores and ranking for contigs which have no related reference genome yet. For more details about SuRankCo and its functioning, please see "SuRankCo: Supervised Ranking of Contigs in de novo Assemblies" Mathias Kuhring, Piotr Wojtek Dabrowski, Andreas Nitsche and Bernhard Y.... -
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nn22 Basic Neural Networks for Octave
Simple .m files, Basic Neural Networks study for Octave (or Matlab)
--> For a more detailed description check the README text under the 'Files' menu option :) The project consists of a few very simple .m files for a Basic Neural Networks study under Octave (or Matlab). The idea is to provide a context for beginners that will allow to develop neural networks, while at the same time get to see and feel the behavior of a basic neural networks' functioning. The code is completely open to be modified and may suit several scenarios. The code... -
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Automatic cell lineage reconstruction
Automatic segmentation and tracking for 3D time-lapse microscopy
From Amat et al., Nature Methods, 2014*: "The comprehensive reconstruction of cell lineages in complex multicellular organisms is a central goal of developmental biology. We present an open-source computational framework for segmentation and tracking of cell nuclei with high accuracy and speed. We demonstrate its (1) generality, by reconstructing cell lineages in four-dimensional, terabyte-sized image data of fruit-fly, zebrafish and mouse embryos, acquired with three different types of fluorescence microscopes, (2) scalability, by analyzing advanced stages of development with up to 20,000 cells per time point, at 26,000 cells min-1 on a single computer workstation, and (3) ease of use, by adjusting only two parameters across all data sets and providing visualization and editing tools for efficient data curation. ... -
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Fingerprint Recognition System
Fingerprint Recognition System 5.3 - Matlab source code
The proposed filter-based algorithm uses a bank of Gabor filters to capture both local and global details in a fingerprint as a compact fixed length FingerCode. The fingerprint matching is based on the Euclidean distance between the two corresponding FingerCodes and hence is extremely fast. We are able to achieve a verification accuracy which is only marginally inferior to the best results of minutiae-based algorithms published in the open literature. Our system performs better than a... -
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High-order HMM in Matlab
Implementation of duration high-order hidden Markov model in Matlab.
Implementation of duration high-order hidden Markov model (DHO-HMM) in Matlab with application in speech recognition. -
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libVMR
VMR - machine learning library
libVMR is a class library written in Java which implements code generator for group method of data handling - GMDH. The library is intended for users, with machine learning skills. libVMR provides an effective framework for the research and development of data mining and predictive analytics. libVMR is based on the most popular neural network model with a higher generalization ability from kernel tricks - vector machine by Reshetov (VMR). The library has been designed to learn from...