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A Python package for segmenting geospatial data with the SAM
The segment-geospatial package draws its inspiration from segment-anything-eo repository authored by Aliaksandr Hancharenka. To facilitate the use of the Segment Anything Model (SAM) for geospatial data, I have developed the segment-anything-py and segment-geospatial Python packages, which are now available on PyPI and conda-forge. My primary objective is to simplify the process of leveraging SAM for geospatial data analysis by enabling users to achieve this with minimal coding effort. I have adapted the source code of segment-geospatial from the segment-anything-eo repository, and credit for its original version goes to Aliaksandr Hancharenka.
Supervised Ranking of Contigs in de novo Assemblies
...Renard
(http://www.biomedcentral.com/1471-2105/16/240/abstract)
PLEASE NOTE, it is recommended to read the paper and the readme.txt file before using SuRankCo.
Update Jun2015:
* Minor changes to enable BAM support.
Update Feb2014:
* Added support for FASTA/SAM assemblies in addition to ACE/FASTQ(QUAL).
NOTE: features of FASTA/SAM assemblies do not include BaseCount, BaseSeqmentCount and ContigQualities yet.
This RapidMiner-plugin consists of operators for feature selection and classification - mainly on high-dimensional (microarray-) data - and some helper-classes/operators.