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Showing 1 open source project for "phageterm"

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    PhageTerm

    PhageTerm

    Determining Bacteriophage Termini and Packaging using NGS data.

    NEW VERSION (PhageTermVirome) AVAILABLE AT : (To access the lightest version) https://gitlab.pasteur.fr/vlegrand/ptv/-/releases This new version is now compatible with PYTHON3 and now allows the analysis of multiple phage genomes/contigs (multifasta) in a single analysis. However, like before, you can still perform the analysis on a single phage genome/contig. Description : PhageTerm and PhageTermVirome are a theoretical and statistical framework to analyze DNA termini and phage packaging mechanisms using next-generation sequencing data. A direct graphical interface is still available as a Galaxy wrapper version at https://galaxy.pasteur.fr (Single contig input version only).
    Downloads: 4 This Week
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