Search Results for "graphml"
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Showing 17 open source projects for "graphml"
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Catlab.jl
A framework for applied category theory in the Julia language
...Macros offer a convenient syntax for specifying categorical doctrines and type-safe symbolic manipulation systems. Wiring diagrams (aka string diagrams) are supported through specialized data structures and can be serialized to and from GraphML (an XML-based format) and JSON. -
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jgraphml
A Java library to write and read graphml diagrams
A Java library to write and read graphml diagrams. This library is compatible with the popular yEd tool. -
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Hypercube
Graph visualizing tool
Hypercube is a tool for visualizing DOT (graphviz), GML, GraphML, GXL and simple text-based graph representations as SVG and EPS images. Hypercube comes with a Qt based GUI application and a Qt-independent command-line tool. It uses a simulated annealing algorithm to lay out the graph, that can be easily parameterized to achieve the desired look. The main development goals are portability and easy usage rather than high performance and complexity. -
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Social Network Visualizer
Social Network Analysis and Visualization software
Visit our new site: http://socnetv.org Social Network Visualizer (SocNetV) is a social network analysis and visualization application. You can draw a social network (graph/digraph) or load an existing one (GraphML, UCINET, Pajek, etc), compute cohesion, centrality, community and structural equivalence metrics and apply various layout algorithms based on actor centrality or prestige scores (i.e. Eigenvector, Betweenness) or on dynamic models (i.e. Kamada-Kawai spring-embedder) -
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Yaoqiang BPMN Editor
an Open Source BPMN 2.0 / DMN 1.1 Modeler
Yaoqiang BPMN Editor is a graphical editor for business process diagrams, compliant with OMG specifications (BPMN 2.0 / DMN 1.1). -
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yEdGen
yEdGen can open a flow chart and generate ANSI C code from it.
yEdGen can generate ANSI C code from a graphml file. You can use yEd Graph Editor, save your flow chart (following some yEdGen rules) in graphml and open it with yEdGen to generate ANSI C code. You can extend yEdGen to generate code for other language. This tool is student oriented. -
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yTOS
Metabolic pathways to Systems Biology standards (SBGN and SBML)
yTOS enables transformation of metabolic pathways generated in yEd graph editor into a computational model defined by Systems Biology standards: SBGN (Systems Biology Graphical Notation) format and SBML (Systems Biology Markup Language) with CellDesigner annotations. yTOS takes as input a graphML file. The example of Glycolysis given with yTOS tool was adopted from http://www.sbgn.org/Documents/PD_L1_Examples . Requirements: Java 1.8 is necessary. -
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A Tool for Retrieval, Visualization and Analysis of biological Pathways. Import a Gene or Protein Set from any Excel file. Automatically find signaling Pathways from KEGG. Integrate your Data in Seconds with a live interactive Force-directed Layout.
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NeDi2GraphML
Generates a Network GraphML Schematic from NeDi Database
Generates a Network GraphML Schematic from NeDi Database. Use yEd (www.yworks.com) to view/edit schematic. More info: http://forum.nedi.ch/index.php?topic=1250.0 -
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VRFmap
Cisco IOS and IOS-XR VRF maps in GraphML
VRFmap is a perl script which takes IOS and IOS-XR configuration files and generates a GraphML schematic with RTs, VRFs and interfaces relationships. Maps can be edited in yEd! -
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Component-Catalogue
Component-Catalogue
...Each component can have: - HTML formatted description - documents and other URLs can be linked - different environment specific versions and status - person of contact for this component - overview of related components - all component details changes are logged and displayed Addition features: - component relations can be categorized and documented - additional option to group components into domains or function/business areas - all components, relations and domins can be exported into graphml format - component categories, relation types and domains can be defined and maintained unrestrictedly - search for component name or person or description - all changes are logged and accessable via the UI -
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VANTED - Visualization and Analysis of NeTworks containing Experimental Data At SourceForge the VANTED development history is preserved, only limited amount of development will proceed here. Please head on to the most recent developments, which can be observed at www.vanted.org.
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Agraffe is a basic visual environment for the design and analysis of graphs, with an emphasis on visual appearance and usability. Try it and you'll be "agrafé"!
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ztest is a java 1.5+ classlibrary for writing structural junit tests. Specify, enforce and reuse an architecture for java based software. Works on java bytecode, no sourcecode changes. Export diagrams to graphml and layout them with yEd.
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Percolation simulator written in Java platfrom. Allow to create regular lattice (rectangle, Kagome, etc) and free-form network.
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...Providing a GUI frontend, it enables you to generate graphs describing build systems (Make, Ant) and API (Java APIs) dependencies. The generated graph data can be stored in common data formats like GraphML or GML. This project is no longer actively developed.
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