Search Results for "gnu science" - Page 99

BoulderALE is an RNA alignment editor, which allows for the annotation of basepairs, annotation and collapsing of features (horizontal) and sequences (vertical), along with 2D display of sequences and base composition given a secondary structure.

Image Inpainting is the art of filling in missing data in an image. The purpose of inpainting is to reconstruct missing regions in a visually plausible manner so that it seems reasonable to the human eye.

PhyloSort sorts phylogenetic trees by searching for user-specified subtrees that contain a monophyletic group of interest defined by operational taxonomic units.

The sibRNAfold program is a modification of the Vienna RNAfold program for RNA secondary structure prediction through energy minimization.

This software simulates cellular behavior based on specific rules (e.g. Game of Life or Wireworld). The UI will be replaceable and there will be a feature for importing rules from a file based on a format developed for this purpose.

LaCor is intended for physical data analysis in High Energy Physics field. It was originally designed to aid in lambda hyperon correlations research in the Selex@FNAL experiment, but it should be useful for similar studies.

Electrical Impedance Tomography and Impedance Spectroscopy software that I am developing for my PhD project.

A simple Java GUI tool for looking at the Spectrum and Cepstrum of a sound clip.

This project aims to provide a reliable cloud computing system, able to work with cloud computing framework existing today. Developed and maintained by Alecsandru Patrascu, Computer Science, University Politehnica of Bucharest

Molecular Interaction Potential Generator MIPGEN is a python program that will calculate Molecular Interaction Potential grids over a given molecule, that could be either a protein or a small organic compound (drug). The output will be a series of grids with DX format (*.dx) that the user will be able to visualize using any Molecular visualization program like VMD, PyMol, Chimera... For more information on dependencies and usage, please read the Documentation. Users are welcome...

RobGP is a genetic programming system written from the ground up in C++. It's primary goals are efficiency, ease of use, and extensibility. It's distinguishing feature is that it has a modified version of Koza's architecture altering operations.

A set of python programs for forward modelling of marine notch formation, along with an pseduo-inverse model for obtaining relative sea level curves from notch data.

The WAVE platform is an open, community-based, interactive website offering a live, dynamic, and social environment that allows all stakeholders to collaborate and deliberate in structured debate. See http://www.wave-project.eu/

gfit creates an interface between computational models and experimental data and provides tools for their analysis

HATS (Haplotype Amplification in Tumor Sequences) is a tool that calls the amplified alleles, and thus amplified haplotype, in copy number aberration regions in next generation sequencing tumor data. The amplified haplotype may reveal gene variants.

PBIEC: Posicionamiento basado en IEC - Implementing IEC 60870-5 data link layer for an open and flexible remote unit. This project is an open source implementation for a data-link layer protocol for telecontrol networks.

ProQuiz is a Professional Quiz Maker Software capable of Generating Quizzes of all types by simple user interface. Its easy to use User interface makes it stand apart from other softwares in this category.

A complete OpenCascade based MESH framework.Note this is not the original SALOME SMESH project but an effort to create a standalone mesh framework based on the existing one from SALOME project, plus adding WIN32 compatibility.

Tifad is a framework to deal with Natural Gas (NG) dispatching for thermoelectrical generation networks. Project blog can be browsed here: https://tifadframework.wordpress.com/

Web based PHP interface to communicate to Maxima computer algebra system in the server. It takes user input, send it to Maxima, and show the output back to website. It could send almost any commands including 'plot2d' and 'plot3d' to plot graphs.

Sempy is a Python package for the solution of partial differential equations using the spectral element method.

This is a C++ library to create and simulate standard and hybrid bond graph. The library support XML input and output of the bond graph structure. Graphic representation of the bond graph in SVG are generated using the Graphviz library.

Palamedes is a plugin that enables users to use Eclipse for Game Description Language (GDL) development, making Eclipse a first class GDL IDE. It comes with many goodies such as syntax highlighting, knowledge base analysis, debug and many other.

A simple tool to help you create an R interface for your Java project. Simply annotate the constructors and methods you want to make available and JAnnotateR will produce a working package, complete with documentation generated from javadocs.

H-mito is a mitochondrial DNA haplogroup prediction tool based on the phylogenetic tree http://www.phylotree.org/. Ancillary scripts: mitoP.py to extract mutation lists and clustal-2-fasta.zip to join, align through clustalw and convert data.