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A plug-in for Abaqus FEA with empiric data for many types of materials (linear, nonlinear, ortotropic). A simple GUI for creating properties for common materials and sections for bulk and shells.
NetBuilder' is a tool for building, visualizing, and simulating multi-layered biological networks, structured as hierarchical Petri-nets. It has a built-in stochastic simulator, but also provides easy access to other simulation and analysis.
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A C++ implementation of Dynamic Field Theory (DFT), Amari kind of space-time continuous fields representing activation of populations in neural cortex. Source code for the GUI is available through SVN.
Ace is a micro kernel for developers and researchers. The main goal is to create a very light and compact kernel from scratch with modern OS research concepts.
This toolkit is a visualized toolkit for manual semantic annotation. This toolkit is divided into 3 components, depending on its target user: COAT annotator, COAT conjugator, and COAT administrator. COAT Light is a version operating on file system.
Manufactured Analytical Solution Abstraction (MASA): a library for applying the Method of Manufactured Solutions to verification of numerical software used for solving systems of nonlinear algebraic and differential equations.
Proteus Cross Compiler system allows the generation and compilation of Java Code from llvm-gcc compatible languages (C/C++/fortran). The generated code will execute at up to 50% of native code.
BAMStats is a GUI desktop tool for calculating and displaying metrics to assess the success of Next Generation Sequencing mapping tools. BAMstats is written in Java and based around the Picard API.
The TIMTAM (Target Information Management Tracking And More) system implements a secure knowledgebase supporting the management, tracking, and analysis of experimental data associated with structural biology projects.
A GUI program written in Perl and utilizing Tk that is meant to solve equations commonly found in math and science. Current equation set is based upon High School Geometry, Algebra II, Trigonometry, and Chemistry with more to come.
A program for converting between physical units, such as feet and meters. There is a Java library, for use in Java applications, and a PalmOS application. It is able to mix units and convert between systems, such as the Metric and the English systems
MySHI (My Self Health Information) is a database for tracking personal health information. The current focus is on nutritional information but other important data items will follow. Documentation is available under "Hosted Apps"/"MediaWiki"
eStudy is an Open Source e-learning and collaboration platform for colleges and universities. In addition to usual course management facilities, eStudy provides special support for role-play simulations in computer science.
A 100% Java client for the DICT protocol (RFC2229). This provides access to lexicons, translating dictionaries, thesauri and similar database over a TCP/IP protocol.
JTransforms is the first, open source, multithreaded FFT library written in pure Java. Benchmark results show better performance than FFTW. The latest version is available at http://github.com/wendykierp/JTransforms.
This is intended as an open-source, multi-platform link diagramming tool for intelligence analysis. The goal is to be able to store objects using any database abstraction or in XML. This project needs much wheel reinvention, so assistance is welcome.
Nutrition Metrics is a food and nutrients intake system created to improve general human diet. Processes the USDA, shows food/nutrient intake reports. Foods editor, recipe generator, advanced search glycemic load. It's a plugin for the I-Metrics CMS
The Generic Genetic Studies Database (GGSD) is a web-based, relational database driven data management software package for the management of large scale genetic studies.