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BNF for Java is a BNF Compiler-Compiler, or Parser-Generator. It implements ISO Standard Backus-Naur Format, using Java. BNF allows you to create a syntax, or a complete language, to parse your data source. Your custom Java extensions generate output.
PROMPT is a system for retrieval, analysis, mapping and comparison of proteins. It allows easy mapping of different types of sequence IDs, data retrieval and integration, a multitude of analysis and comparison algorithms and a full-blown easy to use GUI.
SableVM is a clean-room, highly portable and efficient Java virtual machine. Its goals are to be
reasonably small, fast, and compliant with the various specifications (JVM specification, JNI, invocation interface, etc.).
JVnSegmenter is a Java-based and open-source Vietnamese word segmentation tool. The segmentation model was trained on about 8,000 sentences using Conditional Random Fields (FlexCRFs). This tool would be useful for Vietnamese NLP community.
Cryptomni is a program which can encrypt and decrypt files using the one-time pad cipher. If a key is truly random, kept secret, and never reused, this encryption algorithm can be proven to be unbreakable.
PIWI is a java based system for managing subscribers and mailinglists and sending newsletters. It runs as webapplication (war) or as standalone application for your desktop, with embedded database (hsql) and webserver. You can use it also per commandline
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Cinege is aimed to be the ultimate library (management) system - one day. Currently, it it a very nice tool to make regexp based filtering of bibliographic and item data and find variuos bugs in your existing database.
tinySQL is a SQL engine written in Java. It uses dBase format files compatible with MS Excel. tinySQL comes with a command line interpreter which you can use to create, drop, or update tables. A GUI for tinySQL can be found at www.sqlmagic.com
AstroWeka is a set of extentions to Weka, a popular data mining program, which which allows it to work directly with astronomical data in the Virtual Observatory.
Sting is a simple, host-based approach to detecting arp cache poisoning based man in the middle attacks (such as made by ettercap) on your LAN. It uses SNMP to periodically query the arp cache of your router and make sure its entry for you is correct.
Ovoron's Legacy is a fantasy Play-By-E-Mail game that runs on the PBEM Engine. Each player command an empire of fantasy creatures, interacts with other players, and must seek to conquer the world.
Privale is a p2p network following the form of onion routing/mixmaster networks. But, it is an anonymous publish and retrieval medium, not a proxy system. Privale attempts to defend against denial of service attacks, Sybil attacks, and traffic analysis
Multi is a test tool that generates test ideas from boolean and rational operators. It is written in Java, and includes both a GUI, applet, and command-line utility.
HumanSudokuSolver is intended to solve Sudoku puzzles in a way human beings would do (non brute force). It currently solves most of the puzzles I tried and can output a step-by-step solution. Developers who want to contribute are welcome!
PGA (Petit Generateur entre amis : little generator betwenn friends in french) is a generation kernel to load, manipulate emf models (eclipse) with ATL, and practice code generation with several templating technologies like JSP2, Velocity, Jet.
Pagkalos is an interpreted language written in Java. It supports the lambda-calculus and object-oriented techniques. All statements are writeen in reversed polish notation. Java-classes, objects and methods are easily accessible with the dot-notation.
Java Client for updating your IP address for the DynDNS Service. XML configuration file for easy setup. Logging support to check the status of your updates.
Python DB driver for Java JDBC. Allows CPython programs to use a java JDBC driver to connect with a database server. It's API is Python DB compliant. ZJdbcDA (a zope database adapter) is also included.
jnget is a multi-platform command line tool to retrieve binaries from Usenet. It allows multi-thread downloading and partial or full headers updating and caching and has NZB support.