Search Results for "gnu science" - Page 67
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Showing 5828 open source projects for "gnu science"
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RNNLIB is a recurrent neural network library for sequence learning problems. Applicable to most types of spatiotemporal data, it has proven particularly effective for speech and handwriting recognition. full installation and usage instructions given at http://sourceforge.net/p/rnnl/wiki/Home/
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PBS Cluster Viz is a project to display information useful to admins and users about a computing cluster managed by a PBS-compatible resource manager. Information includes load and job distribution. Interactive as well as static output is available.
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Fidus Writer
The all in one solution for collaborative academic writing.
Fidus Writer is an online collaborative editor especially made for academics who need to use citations and/or formulas. The editor focuses on the content rather than the layout, so that with the same text, you can later on publish it in multiple ways: On a website, as a printed book, or as an ebook. In each case, you can choose from a number of layouts that are adequate for the medium of choice. -
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ExPo: Exchange Portal is an online financial trading exchange platform designed to run controlled scientific trading experiments between human traders and automated trader robots.
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rTRM
Identification of transcriptional regulatory modules (TRMs)
This R package can be used to identify TRMs using experimental evidence from a single ChIP-seq experiment. It combines computational predicted transcription factor (TF) binding sites, gene expression and protein-protein interaction (PPI) data and use it to predict TRMs. -
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drl2g
Convert drl files to g code
This is a utility to process and convert drl files to efficient g code, which will help in drilling PCBs using a CNC. The snapshots are based on the linuxcnc axis program to visualize the results of the program using different algorithms. -
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KYM is a MATLAB / GNU Octave set of functions that implements a wavelet-based automated procedure of quantification and characterization of biological signals. In particular it has been thought for the analysis of the oscillatory component of cytosolic calcium concentration time course.
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AHANNS
AHANNS - Amateur Homemade Artificial Neural Network Simulator
AHANNS enables the user to create and train artificial neural networks. Training is carried out by an implementation of back propagation learning algorithm. See the documentation for details. This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. This program is distributed in the hope that it will be... -
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X-Freq
X-Ray Reflectivity Frequency Analysis
Analyze the thicknesses of a sample from an x-ray reflectivity dataset using Fourier Transform techniques. -
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ClinStudyWeb is designed to provide a flexible infrastructure for managing patient and assay data from clinical studies. It uses a plugin system for study-specific web forms and arbitrarily complex test classifiers, and supports XML import/export.
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Portable Linux
Portable Ubuntu Linux for Scientific Computing
Released August 22, 2013 Lubuntu Blends: Biochemistry 13.04 (Raring) v5.44 Linux Kernel Image 3.8.0-29 Lubuntu Blends are pre-installed Wubi disk image remixes of Ubuntu and Debian Science meta packages, A custom boot loader allows installations to be copied and automatically booted from most external or USB flash drives. Once up and running, use earlier Lubuntu Remix README instructions here until documentation is updated.... -
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is-sfe
Information System "Supercritical Fluid Extraction"
Information System "Supercritical Fluid Extraction" has developed as tool for collecting and analyzing the experimental data from various supercritical fluids experiments. The final target is to help to scientists who worked with supercritical fluids to predict some useful properties such as density, solubility etc. In order to calculate molecular descriptors, parse SMILES and another applied purposes is used Chemistry Development Kit (https://sourceforge.net/projects/cdk). -
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noise-free-cnv
program for analyzing and manipulating DNA microarray data
CNV calling software may produce false-positive calls due to imperfect source material. Direct inspection of the microarray data with the noise-free-cnv software helps to appreciate the quality of the data and to identify artificial calls. With noise-free-cnv it is possible to visualize individual datasets, to compare different datasets and to perform simple transformations. The visualization and the suppression of genomic waves, the comparison of two datasets by subtraction and the... -
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LAVA for AFM
Lloyd's Algorithm-based Volumetric Analysis for AFM Images
This MATLAB-based program enables analysis of AFM images. In particular, it allows the user to measure the volume of all distinguishable features in an image and to isolate and sort those particles. As the name implies, LAVA uses Lloyd's Algorithm, also known as k-means sorting, to identify a small set of volumes representative of the actual distribution of particle in the image. Although developed for determining feature volume, LAVA is also completely compatible with other types of... -
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cccutils
Clock and Control Card Utilities
cccutils provide the sources of the CCC and the CCC-Fanout. -
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Yazoo is a command-line scripting language and a wrapper for co-compiled C routines. Variables, functions, sets, structures, etc. are all the same thing in Yazoo -- this gives it simplicity and significant flexibility. Yazoo is obsolete! Its much-improved successor is Cicada script, which can be found at: https://github.com/heltilda/cicada/tree/master
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ShoX is a scalable simulator for wireless networks written in Java. It is easy to install, configure and use, so that reliable and expressive scientific results can be gathered in a short time. Documentation: http://sourceforge.net/apps/mediawiki/shox
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ATMSP
ATMSP - A Tiny Mathematical Speed Parser
A Tiny Mathematical Speed Parser ATMSP is a portable C++ parser for mathematical expressions like "sin(x)+y^2" e.g. These may contain arbitrary numbers of functions, variables and constants. Major design goal was minimalistic size and maximum speed. Tiny 320 code-lines offer a parser plus bytecode-generator, 26 mathematical functions and 17 supported base-types including complex and arbitrary MPFR-multiprecision. Both parser and bytecode may run in threads. The usage of ATMSP is... -
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ajile
Advanced JavaScript Importing & Loading Extension
ajile: Advanced JavaScript Importing & Loading Extension allows developers to easily create unique namespaces for JavaScript modules and quickly define dependencies that allow scripts to automatically load and import each other as needed. -
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psicode
An open-source quantum chemistry program package
PSI is an open-source program for computing molecular properties using high-accuracy, ab initio, quantum mechanical models. -
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abc-sde
approximate Bayesian computation for stochastic differential equations
A MATLAB toolbox for approximate Bayesian computation (ABC) in stochastic differential equation models. It performs approximate Bayesian computation for stochastic models having latent dynamics defined by stochastic differential equations (SDEs) and not limited to the "state-space" modelling framework. Both one- and multi-dimensional SDE systems are supported and partially observed systems are easily accommodated. Variance components for the "measurement error" affecting the... -
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Kayacc
A Compiler Development Toolkit
Kayacc is an alternate name for the TOMBO project. I am in the process of updating the Tombo project page with version 2.1.0. Please download Tombo2.1.0.tar.gz from the Files tab. Tombo is a compiler generation toolkit for constructing compilers and interpreters. It includes a BNF compiler that generates parsers for context free grammars, and a class library to support compiler development. The class library supports symbol tables, Unicode text manipulation, reserved word mappings,... -
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A collection of implementations of the Paxos and FastPaxos algorithms for solving consensus in a network of unreliable processors. Visit http://libpaxos.sourceforge.net/ for more informations
