Search Results for "clustering algorithm matlab" - Page 5

Showing 126 open source projects for "clustering algorithm matlab"

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  • 1

    K-link

    Read clustering algorithm which identifies and removes chimeric reads

    This project was developed for ESTs. However, there is no reason it cannot be extended for use on amplicon sequences from 454. It is used in conjunction with WCDest clustering software.
    Downloads: 0 This Week
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  • 2
    Gepoclu - Gene Positional Clustering is a suite of Matlab functions for performing positional clustering on genes with optional use of expression data such as what can be obtained from Microarray, EST and qRT-PCR, and PCR.
    Downloads: 0 This Week
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  • 3
    PocketAnalyzerPCA combines a geometric algorithm for detecting pockets in proteins with Principal Component Analysis and clustering. This enables visualization and analysis of pocket conformational distributions of large sets of protein structures.
    Downloads: 0 This Week
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  • 4
    Leark is a Data Mining library developed in C#.NET. It contains several methods for ranking web documents described with a set of normalized features, and a feature selection algorithm. The methods are based on perceptron and clustering.
    Downloads: 0 This Week
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  • 5
    This is a fast C implementation of Arturo Camacho's SWIPE' pitch extraction algorithm. See the project homepage for more about the advantages of the SWIPE' algorithm. swipe-1.0.tar.gz contains the current source, which should compile quite neatly.
    Downloads: 0 This Week
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  • 6
    A tool to automate (i) software/algorithm benchmarking varying a set of control parameters, (ii) manage and summarize the results using plots and tables. The software works with any standalone command line based software or MATLAB.
    Downloads: 0 This Week
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  • 7
    BorderFlow
    BorderFlow implements a general-purpose graph clustering algorithm. It maximizes the inner to outer flow ratio from the border of each cluster to the rest of the graph.
    Downloads: 0 This Week
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  • 8
    Perform local clustering on vector data. Alternatively: psi_square, psisquare
    Downloads: 0 This Week
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  • 9
    This project aims to provide open source software implementing the Wedge algorithm for the estimation of parameters in dynamical systems models. This project also seeks to create tutorials and resources for those using Wedge.
    Downloads: 0 This Week
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  • 10
    Fluster is a clustering algorithm for the Google Maps API v3. It manages all your markers on the map and summarizes them to "clustered markers" if there is not enough space around them. Acts like MarkerClusterer for v2.
    Downloads: 0 This Week
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  • 11
    Linear Time Invariant (LTI) system identification using particle swarm optimization (PSO) algorithm. Creators : Vahid Kiani, Hadi Sadoghi Yazdi
    Downloads: 0 This Week
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  • 12
    Java package to study a clustering model described in the paper \"Novel Clustering Algorithm Based Upon Games on Evolving Network\" by Q. Li, Z. Chen, Y. He and J-P. Jiang (in arxiv: http://arxiv.org/pdf/0812.5064v1), generalizations and similar issues.
    Downloads: 0 This Week
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  • 13
    Software for clustering networks as described in "Information-theoretic approach to network modularity" (Phys. Rev. E 71, 046117 (2005); http://link.aps.org/abstract/PRE/v71/e046117).
    Downloads: 0 This Week
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  • 14
    CHAC is a MATLAB toolbox for statistical downscaling.
    Downloads: 0 This Week
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  • 15
    The Databionics ESOM Tools offer many data mining tasks using Emergent Self-Organizing Maps. Visualization, clustering, and classification of high-dimensional data using databionics principles can be performed interactively or automatically.
    Downloads: 0 This Week
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  • 16
    This Project implements the mergesort algorithm in a MPICH2 (parallel programming -) environment.
    Downloads: 0 This Week
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  • 17
    ...Purpose is to buid an MP3 player with the lowest possible cost. Works on mono files (going stereo shouldn't be very complicated). Doesn't use Helix. The huffman decoding uses a clustering based algorithm.
    Downloads: 0 This Week
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  • 18
    An object-oriented MATLAB toolbox for nonlinear filtering. Includes algorithms for SIR and SIS particle filters as well as an algorithm for the Extended Kalman Filter (EKF). Several discrete-time models are available. Comes with an easy-to-use GUI.
    Downloads: 0 This Week
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  • 19
    Matlab-based software for clustering neurophysiological data. Includes a modular architecture for incorporating algorithms/data formats, methods for comparing and characterizing automated algorithms and visualization/validation tools.
    Downloads: 0 This Week
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  • 20
    distDES is a Java RMI-based application which manages load balancing on heterogeneous clusters. Development will extend the theoretical initial implementation to include clustered Rainbow Table generation and encryption algorithm collision detection.
    Downloads: 0 This Week
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  • 21
    Stand-alone version of OrthoMCL is programmed in PERL, runs in UNIX-like systems. It uses the Markov Clustering Algorithm (MCL) to perform a graph clustering of protein orthologs from multiple eukaryotic genomes.
    Downloads: 0 This Week
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  • 22
    PSO Fuzzy Modeler for MATLAB creates the fuzzy model from the available data automatically using Particle Swarm Optimization (PSO) algorithm.
    Downloads: 0 This Week
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  • 23
    SHReC is a Java implementation of an hierarchical document clustering algorithm based on a statistical co-occurence measure called subsumption, which is particularly suited to the problem of on-line "search results" clustering.
    Downloads: 0 This Week
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  • 24
    IslandEv distributes a Genetic Algorithm (like <a href="/projects/jaga">JaGa</a>) across a network (see <a href="/projects/distrit">DistrIT</a>) using an island based coevolutionary model in which neighbouring islands swap migrating individuals every
    Downloads: 0 This Week
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  • 25
    Web Textual eXtraction Tools C++ Parallel web crawler, noun phrase idenification, Multi-lingual Part of Speech Tagging, Tarjan's Algorithm, Co-RelationShip Mappings...
    Downloads: 0 This Week
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