Search Results for "gnu science" - Page 43
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Showing 5828 open source projects for "gnu science"
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ncPRO-seq
Non-Coding RNA PROfiling from sRNA-seq
ncPRO-seq is a tool for annotation and profiling of ncRNAs from smallRNA sequencing data. It aims to interrogate and perform detailed analysis on small RNAs derived from annotated non-coding regions in miRBase, piRBase, Rfam and repeatMasker, and regions defined by users. The ncPRO pipeline also has a module to identify regions significantly enriched with short reads that can not be classified as known ncRNA families. ############# Docker version : download and run Dockerfile (go in... -
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SFS_CODE (Selection on Finite Sites under COmplex Demographic Events) performs forward population genetic simulations under a general Wright-Fisher model with arbitrary demographic, selective, and mutational effects.
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The Maude Development Tools are a set of plugins that embed the maude interpreter (http://maude.cs.uiuc.edu) in Eclipse. It provides a core plugin, which allows to any Java program to use Maude, and a set of plugins which provide an Eclipse-based IDE
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WiiGesture for Fex/AIR
Allows inclusion of Gesture Interaction via WiiMote in Web-Apps
WiiGesture is a library to add gestural interaction in web-applications that are based on Adobe Flash/Flex/Air. Therefore it uses the WiiFlash service (http://wiiflash.bytearray.org/?page_id=50) to retrieve the sensor data and an internal algorithm based on template matching recognizes performed gestures in real-time. For easier gesture training, a so called WiiGesture-Learning desktop tool was developed that automatically generates gesture templates by performing gestures with at least... -
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Folder
Toolbox for modelling deformation in layered media in 2D
Folder is a tool to simulate and analyse the development of structures in mechanically layered media during layer parallel shortening or extension. It includes a graphical user interface that allows for easy designing of complex geometrical models, defining material parameters (including linear and non-linear rheology), and specifying type and amount of deformation. It also includes a range of features that facilitate the visualization and examination of various relevant quantities e.g.... -
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SPIW - Scanning Probe Image Wizard
Scanning Probe Image Wizard - MATLAB Toolbox
SPIW is a MATLAB toolbox, for automated processing of scanning probe microscope images. Tools are applicable to all SPM images, but the main focus is on images with atomic or molecular resolution. SPIW is primarily a MATLAB toolbox with functions designed to be called in a user's own script. SPIW also has a very basic GUI for browsing and exporting images. For information on SPIW's performance see our publication ( http://dx.doi.org/10.1063/1.4827076 ) in the Review of Scientific... -
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Explore InSAR data and more
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PyRadmon Reborn
PyRadmon, a Python script to use on both Linux and Windows.
PyRadmon Reborn. This project started after the original programmers quit supporting it. The project now contains support for audio*, has a version that supports two Geiger counters** and a cleaner, more stable code. * = PyAudio is used as library for the audio support. ** = The two counters both run in their own thread. UPDATE-2015-2: * Added timeouts to sockets to prevent crashing of the script. * Updated some comments. UPDATE-2015-1: Since there have been some passed time... -
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Semantic MediaWiki
Lets you store and query data within the wiki's pages.
Semantic MediaWiki is an extension to the MediaWiki software (powering Wikipedia), which extends the Wiki with ideas from the Semantic Web. We focus on usability and tight integration. See the web site for further details and GitHub at https://github.com/SemanticMediaWiki/SemanticMediaWiki/releases for the file releases! (since version 2.4.0). -
Go from Code to Production URL in SecondsSkip the Kubernetes configs. Cloud Run handles HTTPS, scaling, and infrastructure automatically. Two million requests free per month.
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Collaborative infrastructure for Collaborative Product Development (manufacturing) within Extended and Virtual Enterprise.
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GUITAR - A GUI Testing Framework
A model-based test automation framework for GUI applications
This framework supports a wide variety of model-based GUI testing techniques. The innovation lies in the architecture of GUITAR, which uses plug-ins to support flexibility and extensibility. Software developers and quality assurance engineers may use this architecture to create new toolchains, new workflows based on the toolchains, and plug in a variety of measurement tools to conduct GUI testing. More detail is presented in this publication: GUITAR: An Innovative Tool for Automated... -
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ENLY
Bioinformatic tool to improve draft genome assemblies by closing gaps
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Systems Biology Simulation Core Library
Accurate and efficient Java library that simulates biological models
This project has been moved to https://github.com/draeger-lab/SBSCL. -
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physicsmata
API for all possible cellular automata that work same at all angles
Its strange how the "sorted pointers" normalizing makes just about any random function, as long as it connects the inputs to the outputs on some path, vibrate as some nonlinear shape of wave. This could be used as a game interface for evolvable musical instruments or fluid puzzle games. Physicsmata is similar in effect to SmoothLife but simpler and pure Java. The cellular automata API takes a function to run at each point. Its parameters are sums of screen brightness (n color dimensions are... -
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Buddy Rock Geotools
Toolbox for geoscientists and geo enthusiasts
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New Terrain and 3D Map System
a very lightweight advanced terrain-rendering and 3D map rendering sys
A very lightweight advanced terrain-rendering and 3D map rendering system. Minimal dependencies: OpenGL, SDL. It's distrib in 2-3 separate modules: 1. the C++ implementation of the terrain- and/or surface- rendering Algorithms I have developed: both a multithread and a non-multithread variant is relaeased. 2. Seme as at point 1. , but with a road-network rendering and collision-detection module I wrote before. It also adds some trees at the top of the terrain. (multitread vesion not... -
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Ganib | Project Management Software
Open Source, tasks, bug tracking, agile scrum, timesheet, wiki
Ganib gives simpler ways to keep your projects organized and on track. Take advantage of easy features that help you quickstart and makes your team more efficient and productive. Open source Web based online agile project management collaboration software free, J2EE platform, MySql database with project dashboards & reporting. Organized Teams & Projects: Easily plan & manage projects with intuitive features to help your team deliver on time. Quickly focus on what's important, easily... -
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We have implemented a core summarizer of scientific articles written in Spanish, with the following components: a tokenizer, a grammar checker, a clarity checker, a cohesion-coherence checker, a common-topic extractor and an output formatter.
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LateXSL is a set of XSLT stylesheets that translates LaTeX embedded in a Web page into HTML, so that math typed directly into a web page as LaTeX is displayed as math in a viewer's browser. The stylesheets may be applied in the browser or by a server.
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Nancy_EX
Quantum Chemistry: Excited States Topology
An open source code for the analysis of electronic excited states: Natural Transition Orbitals; Detachment and Attachment Density Matrices; Quantum Chemical Charge-Transfer Descriptors. The code is intended to postprocess Gaussian 03 and 09 outputs. Important Note: A new release with better compilation option has been released on November the 9th 2015. We strongly advise to use this one since the previous option may have led to some unexpected bugs. -
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Jolie
A service-oriented programming language.
**Note** that releases are outdated on sourceforge. Please refer to our main website: www.jolie-lang.org Jolie is the first full-fledged programming language based upon the service-oriented paradigm, suitable to create new services from scratch or to compose existing ones in powerful orchestrators in order to obtain new functionalities. You can use Jolie for building any kind of distributed applications. Examples are cloud middleware, web portals, and standalone concurrent applications. -
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NBT is an open source Matlab toolbox for the computation and integration of neurophysiological biomarkers. NBT allows for easy implementation of new biomarkers, and incorporates an online wiki with extensive help and tutorials.
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An Octave / LUA scripting language project dedicated to modeling electric motors inside the "Finite Element Method Magnetics" (FEMM) 2-D simulation program. Created to design a motor that fits inside a car wheel, experimenting in many degrees of freedo
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Kaliscope
Sophisticated cinema tool
KALISCOPE is a set of tools and plugins to create a professional pipeline for cinema works. It can also be used to create a telecinema that convert silver films into numeric movies. The goal is to produce reliable sophisticated tools to help artists in their analog/numeric film projects by respecting the quality of their precious images. -
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Defa Protector Allow Mobile Plugin
Allow your mobile user to play Defa Protector Video
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