Search Results for "hidden markov java" - Page 3
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Showing 103 open source projects for "hidden markov java"
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HMM Speech Recognition in Matlab
A speech recognition system using Matlab/Simulink/Stateflow.
This project provide hidden Markov model speech recognition system by using Matlab/Simulink/Stateflow. -
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QuasiRecomb
Probabilistic inference of viral Quasispecies
Please get the binary latest version at https://github.com/armintoepfer/QuasiRecomb/releases Description: RNA viruses are present in a single host as a population of different but related strains. This population, shaped by the combination of genetic change and selection, is called quasispecies. Genetic change is due to both point mutations and recombination events. We present a jumping hidden Markov model that describes the generation of the viral quasispecies and a method to infer its... -
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JProGraM (PRObabilistic GRAphical Models in Java) is a statistical machine learning library. It supports statistical modeling and data analysis along three main directions: (1) probabilistic graphical models (Bayesian networks, Markov random fields, dependency networks, hybrid random fields); (2) parametric, semiparametric, and nonparametric density estimation (Gaussian models, nonparanormal estimators, Parzen windows, Nadaraya-Watson estimator); (3) generative models for random networks (small...
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CGI-HMM
Find CpG island by HMM
Find CpG island for whole genome/chromosome by Hidden-Markov Mode -
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segment
Solve the Viterbi algorithm in a data stream
It is often necessary to assign a series of discrete values to continuosly variable data sequenced by time, position, etc., thereby parsing the data into fewer and larger segments of variable width. The 'segment' utility takes an input data stream as a Hidden Markov Model and applies the Viterbi algorithm to find the most likely segmentation path through the data. -
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SRM2 Sound Recognizer Mobile 2
A Sound Recognition Framework developed to J2ME plataform
The SRM Framework 2 was developed for the J2ME platform supporting sound recognition dependent and speaker-independent, through the recognition techniques DTW (Dynamic Time Warping) and HMM (Hidden Markov Models), in addition to providing support to the import and export of data any stage of recognition enabling the use of external resources as well as the tool running steps on remote terminals. It has the following characteristics: - DTW - HMM (Discrete Models) - Suports Sound in PCM... -
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JaCHMM
Java Conditioned Hidden Markov Model library
The JaCHMM - the Java Conditioned Hidden Markov Model library - is a complete implementation of a CHMM in Java ready to use either on command line or as a module. The JaCHMM is licenced under the BSD licence. It gives an implementation of the Viterbi, Forward-Backward, Baum-Welch and K-Means algorithms, all adapted for the CHMM. JaCHMM is based on the JaHMM and also designed to achieve reasonable performance without making the code unreadable. Consequently, it offers a good way of applying... -
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...) interface defined here. As a result, the users do not have to learn the access protocol of the various DCI systems since they are hidden behind the BES interface.
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gundercrypt [MOVED]
A CLI text encrypting/ciphering program and library for java
** MOVED: to github.com/gundermanc/gundercrypt A CLI text ciphering program and library written in java that makes use of pseudo random numbers and a password (provided by the user) to generate encrypted text by selectively shifting each subsequent letter by a pseudo-random index, encoding it as a letter stored in a hidden position within the String, and then re shifting the encrypted String again by numeric values deduced from a password to provide a dual layer of security. Easily can... -
Red Hat Enterprise Linux on Microsoft AzureRed Hat Enterprise Linux (RHEL) on Microsoft Azure provides a secure, reliable, and flexible foundation for your cloud infrastructure. Red Hat Enterprise Linux on Microsoft Azure is ideal for enterprises seeking to enhance their cloud environment with seamless integration, consistent performance, and comprehensive support.
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ISWYAD
ISeeWhatYouAreDoing - a tool for remote acces with very! low bandwith.
.../Hidden_Server.zip contains the "serious" version with a useful config.txt, no gui (server should run in background) and uses mainly ftp to get its commands, although you can connect via Tcp/Ip and the client from the Bin/Bin.zip or Bin/Client_Only.zip package. The hidden server has an English readme! For further information about the usage of the program please look at Doc/ or at the readmes in Bin.zip (currently both German, sorry). I hope v0.3.0 will follow till 12/12. -
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EvoPromoter is a JAVA application that detects promoter regions in aligned nucleotide sequences using phylogenetic hidden markov models.
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CvHMM
Discrete Hidden Markov Models based on OpenCV
This project (CvHMM) is an implementation of discrete Hidden Markov Models (HMM) based on OpenCV. It is simple to understand and simple to use. The Zip file contains one header for the implementation and one main.cpp file for a demonstration of how it works. Hope it becomes useful for your projects. -
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Trofast Stavekontrol
Trofast is an intelligent spell checker.
Trofast is an intelligent spell checker library based on statistical analysis developed for the Danish language. It makes use of n-grams, hidden Markov models and the Viterbi-algorithm. -
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DETCT
Differential Expression Transcript Counting Technique pipeline
A perl pipeline for identifying differentially expressed genomic regions from transcript counting experiments. The pipeline first uses a Hidden Markov Model (HMM) to identify genomic regions based on the data from the experiment. During the sample counting step the pipeline removes reads which are suspected as being PCR duplicates. The differential expression analysis is currently performed using the DESeq package from Bioconductor. -
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BayesianCortex
simple algorithm for a realtime interactive visual cortex for painting
A paint program where the canvas is the visual cortex of a simple kind of artificial intelligence. You paint with the mouse into its dreams and it responds by changing what you painted gradually. There will also be an API for using it with other programs as a general high-dimensional space. Each pixel's brightness is its own dimension. Bayesian nodes have exactly 3 childs because that is all thats needed to do NAND in a fuzzy way as Bayes' Rule which is NAND at certain extremes. NAND can be... -
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This Java software implements Profile Hidden Markov Models (PHMMs) for protein classification for the WEKA workbench. Standard PHMMs and newly introduced binary PHMMs are used. In addition the software allows propositionalisation of PHMMs.
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jaf_MT
This implements a phrased-based hidden semi-Markov Model for SMT
This package implements the phrased-based hidden semi-Markov model described: Jesús Andrés-Ferrer, Alfons Juan. A phrase-based hidden semi-Markov approach to machine translation. Procedings of European Association for Machine Translation (EAMT), 2009. pp. 168-175. This project depends on jaf_Utils: http://sourceforge.net/projects/jafutils/ Install it prior installation of jaf_MT. -
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Pamvotis is a Wireless LAN Simulator for all the current physical layer extentions of the IEEE 802.11 (IEEE 802.11 a/b/g) standard and for the IEEE 802.11e Draft for Quality of Service in WLANs.
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Used to monitor the kids while they are using the computers transparently by taking screen shots every configurable period and store them in specified location, it also support email or FTP upload according to configurations.
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Data mining tool for sequences (e.g. trajectories on a map, visited web pages, etc.) that creates a succinct description of the sequences, given a taxonomy (e.g. regions and sub-regions in the map, categories and sub-categories of pages, etc.).
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EN: Free Sticky Note in java 1.6+ for Desktop; I T: Free Note per il tuo Desktop compatibile con java 1.6+; 3F Java Notes is a free and open source program that will allow to place lots of sticky notes on your desktop so that you will never forget about
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A test project aiming to create a command-line interfaced virtual pet, with plants instead.
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CThruView is an image viewer that allows mouse clicks to go through the image. Use it as tracing paper or splash screen. The image can be made semi-transparent, flipped, rotated, zoomed, always on top, clipped, moved, hidden and centered.
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Black scalpel is an advanced graphical (Swing gui) security and analysis tool written in Java, C and Assembler (platform independent). Current stage is early alpha, many features are still missing. Use SVN!