Search Results for "computing" - Page 21
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Showing 1576 open source projects for "computing"
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QuickRNASeq
A pipeline for large scale RNA-seq data analysis
We have implemented QuickRNASeq, an open-source based pipeline for large scale RNA-seq data analysis. QuickRNASeq takes advantage of parallel computing resources, a careful selection of previously published algorithms for RNA-seq read mapping, counting and quality control, and a three-stage strategy to build a fully automated workflow. We also implemented built-in functionalities to detect sample swapping or mislabeling in large-scale RNA-seq studies. Our pipeline significantly lifts large-scale RNA-seq data analysis to the next level of automation and visualization. ... -
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LAMA
Heterogeneous Software Development Accelerated
...LAMA's modular and extensible software design supports the developer on several levels, regardless of whether writing his own portable code with the Heterogeneous Computing Development Kit or using prepared functionality from the Linear Algebra Package, the user always gains high productivity and maximum performance. -
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Huffman codes on a Turing Machine
Computing Huffman codes on a Turing Machine
Computing Huffman codes on a Turing Machine -
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Fibonacci numbers on a Turing Machine
Computing Fibonacci numbers on a Turing Machine
Computing Fibonacci numbers on a Turing Machine https://arxiv.org/abs/cs/0601050 -
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Dao Language
Dao Language for Scripting and Computing
Dao is a lightweight and optionally typed programming language with many interesting features. It includes features that can make concurrent programming much simpler. It has well designed programming interfaces for easy embedding and extending. -
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Jonction2 - a tool for computing parameters needed to grow the "PN jonctions" of a solar cell using sputtering or other techniques ... Can compute also electro-dynamics of punctiform-masses using [...]
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PyCNN
Image Processing with Cellular Neural Networks in Python
Image Processing with Cellular Neural Networks in Python. Cellular Neural Networks (CNN) are a parallel computing paradigm that was first proposed in 1988. Cellular neural networks are similar to neural networks, with the difference that communication is allowed only between neighboring units. Image Processing is one of its applications. CNN processors were designed to perform image processing; specifically, the original application of CNN processors was to perform real-time ultra-high frame-rate (>10,000 frame/s) processing unachievable by digital processors. -
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Advanced Simulation Library
Free multiphysics simulation software package
...ASL can be utilized to model various coupled physical and chemical phenomena and employed in a multitude of fields: computational fluid dynamics, virtual sensing, industrial process data validation and reconciliation, image-guided surgery, computer-aided engineering, high-performance scientific computing, etc.. -
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Add-ons for the Eclipse projects Net4j (http://wiki.eclipse.org/Net4j) and CDO (http://www.eclipse.org/cdo). These add-ons are sourceforge'd mainly because the may contain 3rd party components that are incompatible with the Eclipse Public License (E
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Numerical Python
A package for scientific computing with Python
NEWS: NumPy 1.11.2 is the last release that will be made on sourceforge. Wheels for Windows, Mac, and Linux as well as archived source distributions can be found on PyPI. Numerical Python adds a fast and sophisticated array facility to the Python language. NumPy is the most recent and most actively supported package. Numarray and Numeric are no longer supported. -
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lpACLib
An Open-Source Library for Low-Power Approximate Computing Modules
...Besides our novel designs, it also contains implementations for several state-of-the-art arithmetic modules and their approximate versions. This open-source library facilitates research and development in approximate computing at higher abstraction levels, and to facilitate reproducible research and comparisons. In case of usage, please refer to our publication: Muhammad Shafique, Rehan Hafiz, Semeen Rehman, Walaa El-Harouni, Jörg Henkel, "Cross-Layer Approximate Computing: From Logic to Architectures", Design Automation Conference (DAC), 2016. ... -
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OpenMobile
A cross platform, modular, C# driven, mobile computing front end.
A cross platform, modular, C# driven, mobile computing front end. -
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A reworking in C++ of KBMAG. A package and C++ library for computing automatic structures and confluent rewriting system for group and coset rewriting systems, and for computing with finite state automata
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Moscrack is a perl application designed to facilitate cracking WPA keys on a cluster of computers. This is accomplished with any one of Mosix clustering software, ssh, rsh or Pyrit connectivity to nodes. Cluster nodes can run any Un*x variant (includ
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Summingbird
Streaming MapReduce with Scalding and Storm
Summingbird is a streaming + batch hybrid computation framework developed by Twitter. Its aim is to let developers express data aggregation pipelines in a unified way, where the same logic can run either in real time (stream) or in batch mode, and the results can be merged or reconciled. In effect, Summingbird abstracts over multiple execution engines (such as Storm, Scalding, etc.) to provide one high-level program that composes transformations and aggregations, and then executes them in... -
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Gimias
Graphical Interface for Medical Image Analysis and Simulation
GIMIAS is a workflow-oriented environment for solving advanced biomedical image computing and individualized simulation problems, which is extensible through the development of problem-specific plug-ins. In addition, GIMIAS provides an open source framework for efficient development of research and clinical software prototypes integrating contributions from the Physiome community while allowing business-friendly technology transfer and commercial product development. -
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JSensor
high performance computing, Wireless Sensors Networks Simulators
How can we analyze the water quality of a river? How can we monitor streets, cities, provinces of a country? How can we predict and prevent problems coming from earthquakes, snowstorms, fire spreads and all kinds of natural disasters? How can we test some new drugs without using animals? These and many other problems are initially solved by using simulators. It is extremely expensive, and sometimes dangerous, to test initial ideas in a real environment. We must use simulators to achieve... -
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newsscrape
news headline collecting for analysis in determining the category
... - Each news headline is matched against Google News category like Entertainment, Sports, etc. - Called from scheduler to collect this data at 5 minutes interval and be accumulated in a database. - It contains R statistical computing scripts to learn the pattern on words in the headline resulting a particular category. - To test its accuracy in predicting the category from a news headline, select a news title from other sources - e.g. http://rss.news.yahoo.com/rss/entertainment - and incorporate it into the R script for outputting a news category it assumes on the news title. -
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Ganglia
Scalable, distributed monitoring system for high-performance computing
Ganglia is a scalable distributed monitoring system for high-performance computing systems such as clusters and Grids. It is based on a hierarchical design targeted at federations of clusters. Supports clusters up to 2000 nodes in size. -
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4. Bagging Nadaraya Watson Estim. (HPC)
Shell/R program to perform Bagging of the Nadaraya Watson Estimator
Shell/R program which performs bagging of the Nadaraya Watson Kernel estimator by parallel computing -
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Cloudomics-for-AWS
AWS resources for Bioinformatics Workflows & Apps
Library of scripts used for authenticating researchers who submit bioinformatics datasets to an S3 bucket for analytics using AWS resources (Development start : 2015 as part of Cloudomics, formally www.mycloudomics.com) -
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CASE-COMPILER
We wish to design a compiler that runs off of a mobile device
...To do so, we wish to design a compiler that will run on a mobile app, and use google drive and google's extensions to effectively emulate a sit-down, desktop PC programming environment, but in this case, we are able to use a tablet to perform our computing needs. That is the CASE IDE. We are also designing a language specifically for the CASE IDE called simply, CASE. CASE features the newest in Software Engineering and Computer Science. CASE supports streaming and promises, entity pools, and threading is mandatory. CASE also supports micro-pools, that is microservices pooled together. ... -
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UNICORE Life provides Life Sciences components for the UNICORE grid technology. UNICORE Life consists of set of user interfaces (gridbeans) to the popular Life Sciences applications, tools to access different databases and other extensions to the UNICORE
