Search Results for "svdetect"
Sort By:
Showing 4 open source projects for "svdetect"
View related business solutions-
Calmerry is beneficial for businesses of all sizes, particularly those in high-stress industries, organizations with remote teams, and HR departments seeking to improve employee well-being and productivity
-
Drive amazing product experiences with quality product data.
-
1
svdetect.sh is a shell script to run SVDetect to detect SV in exome-seq and Shatterproof to detect chromothripsis. ***Update*** The output files of SVDetect can be annotated by genes with multi-threading.
-
2
svdetectcnv.sh
shell script to run SVDetect with baseline adjustment
svdetectcnv.sh is a shell script to run SVDetect CNV mode. In addition to the original outputs of SVDetect, the script also outputs an adjusted bed.graph with baseline adjusted to the average Log2Ratio of a certain chromosome or all chromosomes, and a sorted density file. **Update*** New version uses the splitted bam produced by exome_test.sh and allows for multithreading to split bam. -
3
contra.sh is a shell script to run contra-cnv mode. In addition to the original outputs of SVDetect, the script also outputs and bed.graph and an adjusted bed.graph with baseline adjusted to the average Log2Ratio of a certain chromosome or all chromosomes, and a sorted density file.
-
4
A tool to identify genomic structural variations from paired-end and mate-pair sequencing data
-
It protects your internal resources such as behind-the-firewall applications, teams, and devices.
- Previous
- You're on page 1
- Next