Search Results for "itk"

Insight Toolkit (ITK). ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions. New location: https://github.com/InsightSoftwareConsortium/ITK

ITK-SNAP is a tool for segmenting anatomical structures in medical images. It provides an automatic active contour segmentation pipeline, along with supporting manual segmentation toolbox. ITK-SNAP has a full-featured UI aimed at clinical researchers.

SimpleITK is an image analysis toolkit with a large number of components supporting general filtering operations, image segmentation and registration. It is built on top of the Insight Segmentation and Registration Toolkit ITK with the intent of providing a simplified interface to ITK. SimpleITK itself is written in C++ but is available for a large number of programming languages. Wrapping of the C++ code is accomplished through SWIG, in principle, any language wrapped by SWIG should be applicable to SimpleITK. Unlike ITK's support of n-dimensional spatio-temporal images, SimpleITK supports 2D, 3D and 4D images. ...

...CMake is used to control the software compilation process using simple platform and compiler independent configuration files, and generate native makefiles and workspaces that can be used in the compiler environment of your choice. The suite of CMake tools were created by Kitware in response to the need for a powerful, cross-platform build environment for open-source projects such as ITK and VTK. CMake is part of Kitware’s collection of commercially supported open-source platforms for software development and integrates with CDash to provide a comprehensive suite of tools. CDash is the testing server that aggregates, analyzes, and displays the results of software testing processes submitted from clients located around the world.

...The applications are all built out of a uniform user-interface framework that provides a very high level (Qt) interface to powerful image processing and scientific visualisation algorithms from the Insight Toolkit (ITK) and Visualisation Toolkit (VTK). The framework allows one to build stand-alone medical imaging applications quickly and easily.

Greedy is a tool for fast medical image registration. It was developed at the Penn Image Computing and Science Lab at the University of Pennsylvania. The motivation for developing greedy was to have a really fast CPU-based deformable image registration tool that could be used in applications where many images have to be registered in parallel - like multi-atlas image segmentation.

...The name is a play on C++, and [incr Tcl] provides a similar object model, including multiple inheritence and public and private classes and variables. Repos now http://core.tcl.tk/itcl and itk

SimpleITK: a simplified layer build on top of the Insight Toolkit (ITK), intended to facilitate its use in rapid prototyping, education and interpreted languages.

This is a Header-Only implementation of the NRRD Image file format. It supports all basic C-types and automatically converts to the type you want. It is templated and allows reading and writing user-defined meta-information to the NRRD-header. It implements "the most important" parts of the following standard: http://teem.sourceforge.net/nrrd/format.html - Does not implement: line skip, byte skip, orientations, encodings other than raw, kinds other than domain. - Converts all type...

...It supports the import of radiotherapy data (e.g. dose distributions and structure sets) from DICOM-RT format and other standard image processing formats by using a bridge to ITK. The RTToolbox supports the full range of radiotherapy evaluation. Tools such as DVH calculation, arithmetic operations on dose distributions and structure relationship analysis are provided as a basis for further calculations. Dose comparison indices such as Conformity Index (CI), Homogeneity Index (HI) and Conformation Number (CN), and biological models including TCP, NTCP, EUD and BED are determined from dose distributions and DVHs. ...

...It is developped by CNES in the frame of the ORFEO program. More information is available at www.orfeo-toolbox.org It is based on the medical image processing library ITK and offers particular functionalities for remote sensing image processing in general and for high spatial resolution images in particular. Targeted algorithms for high resolution optical images (SPOT, Quickbird, Worldview, Landsat, Ikonos), hyperspectral sensors (Hyperion) or SAR (TerraSarX, ERS, Palsar) are available. Orfeo ToolBox has three main access depending on the category of user: write processing chains in C++ using existing filters or creating new ones, use the OTB applications, which is a plugin-based framework allowing to extend high-level processing chains from various environment ( command-line, QT, QGis, Python....) or use Monteverdi, a software for everyday life image manipulation and analysis.

BioImageXD - free open source software for analysis, processing and 3D rendering of multi dimensional, multi data channel, time series image data from microscopy and other sources.

Clipper/XBase compatible compiler with initial support other xBase dialects. Multitasking, OOP,SIX/Comix, SQL and ODBC drivers,a C-API for third-party developers, a few wrappers for popular libraries (such as BZIP, GZIP, GD, Crypto, and Fcgi), ....

The Image-based Vascular Analysis Toolkit is a set of multiplatform C++ libraries for vascular analysis of (3D) medical images, typically CT or MRI. It can be considered as an extension of the Insight Toolkit (ITK) for vascular image analysis, with methods for detection, extraction and modeling of vascular structures.

LiverSegm has been developed with the processing of liver images in mind. This software implements a level set based variational approach that incorporates shape priors and appearance models. It uses ITK Snap as interface.

3D medical image platform for visualization and image processing. Segmentation with Levels sets. Surface reconstruction with marching Cubes, texture Mapping and Raycasting,DICOM support. Integration environment for VTK, ITK and vtkInria3D under wxWidgets

Glass Brain is a tool specifically designed for displaying neural connections within the human brain given multidimensional scan data and a connectivity graph. This project benefits from Qt, VTK, ITK, and CMake.

This project shows how to integrate NVIDIA CUDA GPU programming API into ITK (Insight Segmentation and Registration Toolkit) library

iMEDgine is a software that allows visualization and manipulation of medical 3D image data. The software itself provides the GUI, basic manipulation functionality and interfaces to algorithms as implemented in ITK.

Open Source and Portable object oriented software for 3D digital image segmentation and visualization. Pipes and Filters Architechture. Implemented in C++, and uses FLTK, VTK, ITK, TCL (plugins), and pipeline filters implemented in XML. DICOM support.

DICOMParser is a small, lightweight C++ toolkit for reading DICOM format medical image files. It builds on several platforms including Linux, AIX, HP-UX, IRIX, SunOS, Visual C++, Borland C++, and Cygwin. DICOMParser is used in VTK and ITK.

A themed widget package for Tk/Tcl using the itk/itcl extension