Showing 3 open source projects for "demography"

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    diCal

    diCal

    Demographic Inference using Composite Approximate Likelihood

    ...At present, diCal can infer a piecewise-constant population size history from the genomes of multiple individuals sampled from a single population. We are currently working on extending the method to handle more complex demography, incorporating multiple populations, population splits, migration, admixture, etc. Version 1.3 released on Jan 10, 2014. See "Files" tab for a description of updates. *** Version 2 of diCal, which can handle complex population histories using whole-genome sequences from multiple populations, is available here: https://sourceforge.net/projects/dical2 ***
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  • 2
    phcfM

    phcfM

    R package for modelling anthropogenic deforestation

    phcfM is an R package for modelling anthropogenic deforestation. It was named after the REDD+ pilot-project 'programme holistique de conservation des forêts à Madagascar'. phcfM includes two main functions: (i) demography(), to model the population growth with time in a hierarchical Bayesian framework using population census data and Gaussian linear mixed models and (ii) deforestation(), to model the deforestation process in a hierarchical Bayesian framework using land-cover change data and Binomial logistic regression models with variable time-intervals between land-cover observations. ...
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  • 3
    DeDAY

    DeDAY

    MLE survival analysis: Gompertz, Weibull, Logistic and mixed morality.

    DeDAY (Demography Data Analyses) is a tool of analyzing demography data. It supports Gompertz, Weibull and Logistic distributions. DeDay also supports mixed mortality models based on these distribution such as the Gompertz-Makeham distribution. Distributions such as Gompertz describes only age-dependent mortality, which increases over time.
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