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CyNetSVM is a tool developed in JAVA and integrated as a Cytoscape APP to predict clinical outcome and identify network bio-markers by integrating gene expression data and PPI data.
The app can be installed directly from Cytoscape app store.
We also provided the package at
http://sourceforge.net/projects/netsvmjava/files/netSVM.zip/download
The example data to test the package is available at
http://sourceforge.net/projects/netsvmjava/files/Example.zip/download
The user manual is available at http://sourceforge.net/projects/netsvmjava/files/UserManual_CyNetSVM.pdf/download