Search Results for "cluster hpc"
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Showing 27 open source projects for "cluster hpc"
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AWS ParallelCluster Node
Python package installed on the Amazon EC2 instances
aws-parallelcluster-node is the python package installed on the Amazon EC2 instances launched as part of AWS ParallelCluster. AWS ParallelCluster is an AWS-supported Open Source cluster management tool that makes it easy for you to deploy and manage High-Performance Computing (HPC) clusters in the AWS cloud. Built on the Open Source CfnCluster project, AWS ParallelCluster enables you to quickly build an HPC compute environment in AWS. It automatically sets up the required compute resources... -
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Covalent workflow
Pythonic tool for running machine-learning/high performance workflows
Covalent is a Pythonic workflow tool for computational scientists, AI/ML software engineers, and anyone who needs to run experiments on limited or expensive computing resources including quantum computers, HPC clusters, GPU arrays, and cloud services. Covalent enables a researcher to run computation tasks on an advanced hardware platform – such as a quantum computer or serverless HPC cluster – using a single line of code. Covalent overcomes computational and operational challenges inherent... -
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AWS ParallelCluster Cookbook
The Chef cookbook used to build and bootstrap AWS ParallelCluster
AWS ParallelCluster is an AWS supported Open Source cluster management tool that makes it easy for you to deploy and manage High Performance Computing (HPC) clusters in the AWS cloud. Built on the Open Source CfnCluster project, AWS ParallelCluster enables you to quickly build an HPC compute environment in AWS. It automatically sets up the required compute resources and a shared filesystem and offers a variety of batch schedulers such as AWS Batch and Slurm. AWS ParallelCluster facilitates both... -
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Kaleidoscope-SDK
User toolkit for analyzing and interfacing with Large Language Models
kaleidoscope-sdk is a Python module used to interact with large language models hosted via the Kaleidoscope service available at: https://github.com/VectorInstitute/kaleidoscope. It provides a simple interface to launch LLMs on an HPC cluster, asking them to perform basic features like text generation, but also retrieve intermediate information from inside the model, such as log probabilities and activations. Users must authenticate using their Vector Institute cluster credentials. This can... -
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GCMT
Gentoo Cluster Managment Tools
A collection of bash scripts to manage Gentoo System Images (GSIs), compute nodes, file servers and users on a Gentoo-based HPC cluster. GCMT works with PXE boot, dhcp, tftp, qmail, djbdns and tinydns, NIS, NFS, and TORQUE. -
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Singularity
Open source container platform designed to be simple, fast, and secure
Singularity is an open-source container platform designed to be simple, fast, and secure. Many container platforms are available, but Singularity is designed for ease of use on shared systems and in high-performance computing (HPC) environments. -
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progrep
Utility to show live progress, status & stats for running simulations
progrep is a command-line tool (Linux) to show live progress report, status & stats of a running simulation or compute job that executes a given number of iterations. It shows % completed, time remaining, time elapsed, number of threads, MPI_Rank(if any), CPU usage & speed (FPS). The FPS measures may be used in benchmarking, e.g. while optimizing HPC algorithms for performance. progrep supports both single-threaded and parallel (multicore/multinode - e.g. OpenMP/MPI) jobs. progrep can also... -
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EECluster
Tool for energy-efficient resource management in HPC clusters
EECluster is software tool for managing the energy-efficient allocation of the cluster resources. EECluster uses a Hybrid Genetic Fuzzy System as the decision-making mechanism that elicits part of its rule base dependent on the cluster workload scenario, delivering good compliance with the administrator preferences. In the latest version, we leverage a more sophisticated and exhaustive model that covers a wider range of environmental aspects and balances service quality and power consumption... -
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TOFFEE-DataCenter
Linux Server and Data-Center WAN Optimization
TOFFEE-DataCenter is the new TOFFEE variant meant for Data-Center, Server, HPC, Load Balancing, Cluster/Cloud Computing and SDN deployments. With TOFFEE-DataCenter (and or TOFFEE), OEMs and other equipment vendors can make use of this platform/stack, integrate, port and build WAN Optimization devices/appliances on to their existing product range. Or build a dedicated WAN Optimization hardware product series via the same. -
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JavaCá&Lá
A java middleware for HPC and IoT
The Java Cá&Lá (or just JCL - www.javacaela.org) is a middleware that integrates high performance computing (HPC) and Internet of things (IoT) in a unique API. It enables asynchronous remote method invocation and distributed shared memory services over multicore computer architectures or over multicomputer clusters. Sensing services are also feasible in JCL IoT version. An API for internal control enables collecting several times and memory usage of tasks submitted to the JCL cluster. Finally... -
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BOWS
Bioinformatics Open Web Services
... the requisition status from waiting to running, run the process in the HPC cluster and, when the job is complete, call a BOWS back-end service to send the results. The results will then be available to the requestor. BOWS is called from the front-end by Web Services, therefore a program running in a simple computer can benefit of high performance computation executed elsewhere. doi:10.1186/s13104-015-1190-0 -
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UIBK software deployment framework
Providing scientific computing software to HPC users.
... University, Linz). The framework is also in use at the Vienna Scientific Cluster 3, the largest HPC system in Austria. -
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2. Tune kernel Ridge MM (HPC parallel)
Shell/R program which tunes kernel Ridge by parallel computing
A shell/R program for HPC Linux clusters which allows users to estimate the optimal rate of decay parameter for kernel Ridge regression, within the mixed model framework, for prediction. The optimal rate of decay is estimated using K-folds cross validation parallelized using cluster nodes. -
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<myJAM/> is a web based monitoring and accounting tool for HPC clusters with pbs-like batch-systems (e.g. Torque or PBSPro).
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XNDiff
X-ray and Neutron powder pattern simulation analysis
Keywords (XNDiff): -SAXS -SANS -absolute units -core (double)shell crystalline nanoparticles -with a parallelepidal shape -particle assemblies -powder and ensemble average -C/C++ -Unix -OpenMP -HPC Cluster Keywords (BatchMultiFit): -simultaneous fits for several SAXS and SANS curves with simulation data from XNDiff -SANS data can be smeared with dq values from experimental data sets or analytical functions -Mathematica console -local and global optimizers (simulated annealing... -
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Kepler Monitoring
Kepler is a monitoring system for HPC clusters
Kepler is a monitoring system for HPC clusters : it allows users to monitor cluster elements like nodes, network devices and storage nodes. Analyse can be centered on jobs to determine performances and behaviours. -
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Comparison of Energy Efficiency between a Desktop Grid System (BOINC) and a HPC Cluster System (Mogon) This is a thesis written at the Universität Paderborn, Germany -Gokul Krishnan
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tuda-rsync_install
install method for cluster compute nodes
Tuda-rsync_install is a initrd image containing scripts to partition and rsync a rootfs to compute, or other nodes. A fast, easy and flexible solution not only for HPC systems, although it has been developed for that purpose. -
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SprezzOS
SprezzOS -- Linux for the discerning power user.
SprezzOS Linux seeks to provide the premier experience for power users, HPC junkies, cluster administrators and anyone else for whom Debian Unstable is insufficiently hardcore. -
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Dress Up RNA seq
End-to-end automated pipeline of RNA seq packages for an HPC system
The purpose of DressUp is to create an end-to-end RNA seq pipeline in which all of the steps of analyzing data from an Illumina sequencer is done in one step in an HPC environment. RNA seq programs included are TopHat, CuffLinks, CuffDiff, CuffMerge, FastQC, and trimming using the FastX toolkit. DressUp facilitates RNA seq programs by streamlining various packages into a single script. That script executes the RNA seq programs on a batch cluster system. Upon execution of the script, jobs... -
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hpc-sjm
Simple Job Manager
SJM is a tool for managing jobs running on a compute cluster with a job scheduler such as Sun Grid Engine or Platform LSF. Use it to manage dependencies between jobs, monitor job completion status, restart failed jobs without rerunning jobs that finished successfully, and more! -
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Cleo cluster batch system
Smart extendable batch manager + scheduler for HPC
Cleo is written on perl5 and works on Linux and hopely on most UNIXes. This is the batch system for computational clusters, which supports possibly most parallel envinronments. -
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This is a software tool that automates the process of benchmarking high performance computer clusters by auto analyzing the hardware of the cluster and configuring and compiling specialized benchmarks (HPC Challenge, IOzone, Netperf)
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HPC cloud computing for OpenFOAM (R) users
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LEMMing stands for Linux Enterprise Management and Monitoring. It's an environment that aims an easy way to take care of your HPC cluster. It is based WebServices. That lets you LEMMing multiple clusters throght the same interface.