Search Results for "output" - Page 91
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Showing 4138 open source projects for "output"
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Auth0 B2B Essentials: SSO, MFA, and RBAC Built InAuth0's B2B Essentials plan gives you everything you need to ship secure multi-tenant apps. Unlimited orgs, enterprise SSO, RBAC, audit log streaming, and higher auth and API limits included. Add on M2M tokens, enterprise MFA, or additional SSO connections as you scale.
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PhyloPipe
PhyloPipe is a combination of some polular phylogenetic software
...Analysis of the evolutionary biology, one of the main branches of bioinformatics, uses several common software such as HaMStR,MUSCLE, RaxML. Running different procedures successively, we can get the evolutionary analysis eventually. Since the input and output data between different software are not always compatible for each other, the intermediate results need to be processed outside these software, which definitely brings trouble for biologists. Therefore, developing a graphical molecular phylogenetic analysis software is sure to improve the efficiency of evolutionary analysis in a large scale. -
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This Java library provides the possibility to bypass Java console outputs to one or more other output devices who can be better handled by Java applications. Currently available devices are: Logfile device, JTextPane device and JList device.
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BIRAP
Bacterial Intergenic Region Analysis Pipeline
...The tool integrates expression profile derived from RNA-seq and/or proteogenomics, compares it with existing in silico annotation and helps validate annotation, identify novel protein coding regions, putative non-coding RNA as well as help correct er-rors in the existing annotation. The pipeline requires “pileup” output from SAMtools for RNA-seq data and peptide/ePST locus file (GFF) from the Proteogenomic Mapping tool for prote-ogenomics data along with the genome and existing in silico annotation. When information regarding the locus of promot-ers and terminators in the genome (in .coords format) is pro-vided, the pipeline will also help identify non-coding RNA. -
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...For examples of these outputfiles check the screenshots. ADOMA uses ClustalW to create the multiple alignment from DNA or protein sequences and displays them slightly different than the normal output of ClustalW. ADOMA is a commandline program that can easily be used in pipelines. For more information check the README.md in the Files section. How to cite ADOMA: Zaal, D. and Nota, B. (2016), ADOMA: A Command Line Tool to Modify ClustalW Multiple Alignment Output. Mol. Inf., 35: 42–44. doi: 10.1002/minf.201500083 http://onlinelibrary.wiley.com/doi/10.1002/minf.201500083/abstract
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ARIN RESTful Whois
ARIN RESTful Whois Retrieve and Store
Is a simple utility written by Mark T. Vitt to grab ARIN IP Block information for admin research and security. Its output includes basic WildCard, Netmask, and IP range information. Stores locally in MySql Table. Is currently being used by automated processes for research purposes. -
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Cluster Orchestrator
orchestrator / cluster deployment tool
...In case you want to deploy your code or just call your preferred DSC client to apply the configuration locally the Orchestrator can be a handy tool. The operation can be started manually or scheduled, depending on your needs. In terms of audit and trace capabilities, the system is collecting all console output of your shell scripts from all servers and saves the logs centrally for review. -
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ADSBET
ADSBET - Auomated Determination of Salt-bridge Energy Terms
Program: ADSBET--Automated Determination of Salt-bridge Energy Terms Author:c)--Arnab Nayek, Parth Sarthi Sen Gupta, Shyamashree Banerjee, Sunit Das, Vishma Pratap Sur, Pratay Seth, Rifat Nawaz Ul Islam and Amal K bandyopadhyay* Department of Biotechnology,The University of Burdwan, India -
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tuptime
Total uptime command
Report historical and statistical running time of system and other components, keeping it between reboots. Like uptime command but with more interesting output. NOTE: Tuptime was completely rewriten in python and now its available in https://github.com/rfrail3/tuptime -
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**(9 march 2016) this project is continued on github : http://jaapkroe.github.io/polypy ** Python script to analyze (shortest-path) rings in structures read from xyz-files. It can be useful for example to identify defects in crystal structures or molecules.
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Custom VMs From 1 to 96 vCPUs With 99.95% UptimeLive migration and automatic failover keep workloads online through maintenance. One free e2-micro VM every month.
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XLogo4Schools
A Logo interpreter and programming environment specialized for schools
...Some commands which were buggy in the original XLogo have been fixed. The interpreter works now more efficient due to the usage of more suitable data structures. The output of turtle graphics is now smoother and more appealing due to different rendering settings. Various features have been added to support better user experience and satisfaction in schools. @Translations: The new GUI parts are available in * English * German * French * Italian If you would like to make the application available in your language and if you would like to contribute, please contact us... -
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TinyRenderer
A brief computer graphics / rendering course
...My students typically require 10 to 20 hours of programming to start producing such renderers. The input is a 3D model composed of a triangulated mesh and textures. The output is a rendering. There is no graphical interface; the program simply generates an image. To minimize external dependencies, I provide my students with a single class for handling TGA files — one of the simplest formats supporting RGB, RGBA, and grayscale images. This serves as our foundation for image manipulation. At the beginning, the only available functionality (besides loading and saving images) is the ability to set the color of a single pixel. -
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QA plugin for DITAOT
DITA Open Toolkit plugin that creates an HTML QA error report
This DITA Open Toolkit plugin identifies errors in DITA tagging, element nesting, language standards, and common syntax errors, many of which are based on the Microsoft Manual of Style for Technical Publications. The plugin produces a .dita file including all violation data, which is then rendered in HTML and .csv formats. Quality assurance checks are highly customizable to fit project needs. -
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simple_patient_ping
Simple Patient Ping
Simple Patient Ping is a very basic outbound interface that queries a MySql database using Mirth. Basically PHI (patient data from a hospital) is in one table called patient ping and Mirth query's the database and writes the output to a local drive. This interface is more of a way to show how to query a database and get the data. Once it's outbound of the DB, you can use Mirth to send to a HIS or application. Its for you to decide what you want to build the data around. -
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A HID interface component for LinuxCNC/EMC. HID is USB speak for Human Interface Device, that is, input/output USB devices such as joysticks, gamepads, CNC pendants. This component was built to support devices that weren't handled by stock LinuxCNC/EMC components.
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Steelhead PowerCLI
Enhanced CLI for Steelheads
Run standard commands on multiple Riverbed Steelhead boxes. Log output to file. Run new custom made advanced commands. -
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arduinounipwmlib
Small library for Arduino nano (only) for software PWM control
This is a library for Arduino nano for use in RC model building. It allows allows control of 8 PWM channels for LED or servo operation. Please note, that is is compatible with Arduino Nano and Arduino IDE 1.0x only. -
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AnomalyDetection
Anomaly Detection with R
AnomalyDetection is an R package developed by Twitter for detecting anomalies in seasonal univariate time series. It implements the Seasonal Hybrid Extreme Studentized Deviate (S‑H‑ESD) test, which reliably identifies both global and local outliers in data with trends and seasonality—commonly applied to system metrics, engagement data, and business KPIs. -
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ccwatcher
A computational chemistry monitoring, parsing and plotting application
ccwatcher monitors the progress of computational chemistry calculations during runtime. It has both a GUI and a "Command Line Interface" to which it parses important output and plots SCF energies. -
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vnStatSVG should be the best web front-end to vnStat (a network traffic logger). It only requires a CGI-supported http server setup but also generates a great graphical report with SVG. NO PHP REQUIRED! It works for Linux server, cluster and even for a busybox based embedded Linux system. It has been tested with Apache, Nginx and even the lightweight httpd server of Busybox. vnStatSVG is friendly to generic Linux hosts, servers, embedded Linux systems and even Linux...
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WigMaker
make wiggle file from bed file for ChIP-seq samples
This application takes bed file(or gzip bed, with .gz extension) as input, it creats a single file or a fold like 'wigs for xxx' in which the chromosome separated wiggle files will be saved. Users can set the wigextend value and step value for the output wig files. By default, they are 200 and 25. The application requires a lot of memory (about 2GB) -
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GUItars
GUItars is designed for the analysis of high throughput RNAi data.
...Version 3.0 released for Windows and Mac: experiment-wise analysis option, map to all samples option (no hit cut-off needed), percent activity for replicates option and .ai output format are added -
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GitHub Training Kit
Open source courseware for Git and GitHub
Open source courseware from the GitHub Professional Services team. This repository currently contains Git and GitHub cheat sheets. Site content is licensed under CC-BY-4.0. CC-BY-4.0 gives you permission to use the content for almost any purpose but does not grant you any trademark permissions, so long as you note the license and give credit. Code used to build and test the site as well as code samples on the site, if any, are licensed under CC0-1.0. CC0 waives all copyright restrictions but... -
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My Twitter Scraper
Filters Twitter in real time against your keywords and outputs to .csv
Program allows users to filter main Twitter stream against specified keywords. Output is shown on screen, and when finished, a csv file is created containing all of the captured tweets, usernames, times, and location. Is built to run for extended periods with minimal growth in RAM usage as number of captured tweets increases. Uses both twitter4j and Open-CSV. YOU MUST HAVE JAVA 1.8 INSTALLED, and you will need to get your own OAuth tokens from Twitter. -
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VERDI is a flexible, efficient, and modular Java-based visualization software tool that is used to visualize multivariate four dimensional gridded environmental datasets such as those output by air quality models.
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WinDbgTool
Simplify managed dumps analysis.
...Analysing memory dumps using WinDbg is rather complex in some cases. Tool is intended to automate such analysis for managed application dumps. WinDbgTool is also able to parse some WinDbg commands output and display results not using plain text but via grid control which can filter and sort data.
