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PAIDA is pure Python scientific analysis package and supports AIDA (Abstract Interfaces for Data Analysis). PAIDA can create/plot histograms and functions etc. The parameter optimization and its error evaluation are also supported. Can use with Jython!
This project is A Mitochondrial OxydoReduction Simulation System. It consists of two linked projects: a program for displaying and analysing large biomolecular systems (Floral) and a multi-agent simulator for biomolecular oxydoreduction systems (AMORSS).
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Mind this project is no longer maintained. You might be interested in having a look at
http://pythonhosted.org/plasduino/
instead.
Framework for data acquisition through the parallel port, suitable for performing simple didactic physics experiment.
The Toolkit for Advanced Discriminative Modeling (TADM) is a C++ implementation for estimating the parameters of discriminative models, such as maximum entropy models. It uses the PETSc and TAO toolkits to provide high performance and scalability.
a webbased multiuser bibliography management tool. it allows to convert to bibtex, bibtexml and other formats such as html, text,.. the user is allowed to define own formats via xsl style sheets. anonymous users can be allowed to browse lists
The goal of zAutomation project is to design/implement hardware, firmware and software for remote control and monitoring of physical objects, by using the ZigBee technology and internet. The field of application is robotics and domotics.
EuCAP is a web based tool and pipeline to that facilitates the submission of functional and structural community annotation to a genome annotation project.
VOMON (Virtual Observatory Monitor) is a web application that can be configured to watch your virtual observatory services. It is a mashup of the AstroRuntime and the MARS network monitor.
Open Office Server Daemon based on older daemon written in python (oood).
Open Office is unstable as a server (memory leaks, not multithreaded, ...), this daemon makes it working in long-term without having to change anything in your code.
Visit [http://www.gmfg.buffalo.edu] GMFG website for More information. A user guide for TITAN is made available on GMFG website. We strongly recommend all the users to register with GMFG website for future updates
TAROT is a easy-to-use framework for Monte Carlo simulations in python. Calculations between different kinds of randomly distributed numbers are made as easy as basic arithmetics. Tarot provides an interactive graphical interface for interpretation.
This project is an open source implementation of axial space syntax software. Space syntax is an analytic urban theory used by researchers to understand elements of the structural aspects of design and how these effect pedestrians and social interaction.
PyPeriod is a software for register and control woman's periods. This show the days passed from the last period, the average of days of periods and the period history. This is useful for womans who need checking often hers periods for health reasons.
Moved to GitHub in 2013. This SourceForge project is no longer updated.
Source code and documentation:
stokes: https://github.com/kichiki/stokes
libstokes: https://github.com/kichiki/libstokes
libiter: https://github.com/kichiki/libiter
twobody: https://github.com/kichiki/twobody
RYUON User's Manual: https://github.com/kichiki/RYUON-manual
RYUON : many-particle simulation suite
the pIG bulk-processes data files generated by 'popular' scientific behavioural programs, including Med Associates MedIV-PC, Coulburn TruScan and Kinder Scientific.
The Biomolecule Toolkit is a library for modeling biological macromolecules such as proteins, DNA and RNA. It provides a C++ interface for common tasks in structural biology to facilitate the development of molecular modeling, design and analysis tools.