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DuffyRNAseq is an Rpackage that implements an analysis pipeline for processing RNA-seq data from Illumina NextGen sequencers, to measure gene transcription and differential expression.
This project adds a ribbon to excel with a number of statistical buttons. This is not intended to be a full statistical analysis package (like R), but only a source for quick visualizations and calculations. For Excel2007 and up
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JMulTiR is an econometrics package designed for univariate and multivariate time series analysis. The numerical computations and graphics are done in R (www.r-project.org), the GUI is programmed in Java Swing with the jstatcom framework.
RmiR is an Rpackage for the analysis of microRNA and gene expression microarrays.
The package is designed to coupling microRNA and gene expression data, using different databases, like TargetScan, mirBase, picTar,TarBase and others...
A collection of discreet, mostly Web-related libraries, utility classes, and some AWT code (good for applets). Package xentity implements a JDBC-based administrative system for building an O/R persistence layer.
R2HTML is a package for R, which includes HTML function and methods to output R objects to HTML. Allow for redirection on the fly. A driver for Sweave allows to parse HTML flat files containing R code and to automatically write the corresponding outputs.
depmix is a package for the R statistical computing environment, to fit (multigroup) mixtures of latent Markov models on mixed categorical and continuous
(timeseries) data
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R Tools for Biologists (RT4Bio) is a multi-functional package writen in R language developed in the Laboratory of Behavioral and Computational Ecology at State University of Montes Claros - MG - Brazil. Formerly known as RRJ.
RDBLib (aka R-MSSQL) is a driver and an extension to the GPL'ed R Statistics
software package. It allows direct, native and FAST access to
Microsoft SQL Server databases within R. It is based on R-MySQL
and FreeTDS. It has been tested on Linux.
W-view is a network management software that takes advatage of ICMP pings, port connection sniffer, and SNMP. I wrote W-view to create a
simpler, smaller, and more stable replacement of N*tV**w.
Note: For complete SNMP management, this package also r
WinHME is a Halo Map Expander-GUI for Win32. It is written in VB6.
HaloMapExpander is an app that can manipulate the Halo1 maps on Xbox, or PC. For more info, consult the console readme file contained in the binary package.
HME Resurrected Supports r
FishAssess is an add-on package in R language on fisheries resources assessment and management. The goal is to implement methods commonly used in fishery science integrated with graphical and statistical capabilities of R.
This open package aimed to addresses frequency distribution, run-chart, X-chart, R-chart, X-bar and S-chart, R-bar and R-chart, X and MR-chart, standard deviation, Control limits, Process Capability, p and np type charts, c and u type charts.
A file synchronisation tool for KDE that allows easy synchronisation of files between, for example, a local directory and an FTP site. Inspired by the file management tool of a well-known Mac and Windows web package (am I allowed to say Dreamweaver(R)?)
AVUpdate is an script-package to automatically update the
AntiVir antivirus Software from H+BEDV on Linux/BSD Machines for
which H+BEDV haven't created an auto-updater.
The scripts can also update the antivir-Tree for the Antivir/Win-Feature "Intrane
This is a SAS(r) Software macro package for performing multipoint QTL mapping using the DeFries-Fulker multiple regression approach to unselected and selected samples.