Search Results for "genetic algorithm java" - Page 8

Showing 731 open source projects for "genetic algorithm java"

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  • 1

    Simple File Manager

    A simple file manager especially for flash disks

    It is a simple software implemented with Java. The running environment is Java SE8, with some features of Javafx to improve the UI appearance.
    Downloads: 0 This Week
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  • 2

    CUDAlign

    CUDAlign is a tool that aligns huge DNA sequences in CUDA capable GPUs

    CUDAlign is a tool able to align pairwise DNA sequences of unrestricted size in CUDA GPUs, using the Smith-Waterman algorithm combined with Myers-Miller. It produces the optimal alignment of 1 million base sequences in 45 seconds using a GTX 560 Ti. Many optimizations are being developed for this software. Look at the following papers for detailed information: [1] Edans Sandes, Alba Melo. Retrieving Smith-Waterman Alignments with Optimizations for Megabase Biological Sequences using GPU. IEEE...
    Downloads: 1 This Week
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  • 3
    HaploView is a Java based tool for use by biologists in the study of genetic haplotype data. It provides a quick, easy interface to many common tasks involved in such analyses. Please go to the homepage below for the latest version!
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    Downloads: 34 This Week
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  • 4

    gametes

    Generate complex SNP models and heterogeneous datasets

    Genetic Architecture Model Emulator for Testing and Evaluating Software (GAMETES) is an algorithm for the generation of complex single nucleotide polymorphism (SNP) models for simulated association studies. GAMETES is designed to generate epistatic models which we refer to as pure and strict, that constitute the worst-case in terms of detecting disease associations, since such associations may only be observed if all n-loci are included in the disease model. User friendly GAMETES software...
    Downloads: 2 This Week
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  • 5
    sWangTiler

    sWangTiler

    A java implementation that generates wang tiles from any input image.

    sWangTiler is a java implementation that generates wang tiles from any given input image. By assembling wang tiles that share common edges (like domino pieces) one may generate textures of any desired size. Wang tiles greatly reduce visible repetitions making textures seem more natural and thus improve the quality of any graphic application like games, simulations etc. This implementation is based on the strict wang tile algorithm as proposed by Xinyu Zhang and Young J. Kim in "Efficient...
    Downloads: 0 This Week
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  • 6

    GeneticThesaurus

    Annotation of genetic variants in repetitive regions

    GeneticThesaurus enables analysis of genetic variation in repetitive regions. See project wiki for details.
    Downloads: 0 This Week
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  • 7
    Cenobi

    Cenobi

    cost estimation and management accounting, using neural networks

    Cenobi is designed for management accountants, not (only) for statisticians and data mining experts. Carefully arranged default settings make sure you can concentrate on Cenobi's many accounting features rather than worrying about setting up artificial neural networks or genetic algorithms, which are the main machine learning tools under Cenobi's hood. Cenobi's main benefits are: - ease of use - Utilizing artificial neural networks to estimate cost relationships, Cenobi is able...
    Downloads: 0 This Week
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  • 8
    MODLEM

    MODLEM

    rule-based, WEKA compatible, Machine Learning algorithm

    This project is a WEKA (Waikato Environment for Knowledge Analysis) compatible implementation of MODLEM - a Machine Learning algorithm which induces minimum set of rules. These rules can be adopted as a classifier (in terms of ML). It is a sequential covering algorithm, which was invented to cope with numeric data without discretization. Actually the nominal and numeric attributes are treated in the same way: attribute's space is being searched to find the best rule condition during rule...
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    Downloads: 66 This Week
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  • 9

    mpz_aprcl

    MPZ APRCL can prove the primality of numbers, written in C and GMP.

    This code contains an implementation of the APR-CL primality proving algorithm. It is a conversion of the Java based APRT-CLE written by Dario Alpern, who had written his based on the UBASIC version from Yuji Kida. This version incorporates improvements based on Jason Moxham's APR-CL code, which greatly reduced run-time memory requirements. mpz_aprcl is meant to be compiled on systems that support C, GMP, and a 64-bit data type. It can prove the primality of numbers up to 6021 digits long...
    Downloads: 1 This Week
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  • 10
    Intelligent Keyword Miner

    Intelligent Keyword Miner

    Intelligent SEO keyword miner and predicing tool

    ..., you can choose to reset or train it further. Programs that have similar idea are: Google AdWords, SERPWoo's Keyword Finder, Wordpot, and others. Difference is, this program is intelligent and it accepts your input data and then predicts keywords based on your likes or dislikes. As the main engine, it uses the SMOReg algorithm to analyze and map the keyword frequencies of your data. This can be a great SEO tool to help increase the traffic of any website featuring a product.
    Downloads: 0 This Week
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  • 11

    mpz_aprcl32

    MPZ APRCL32 can prove the primality of numbers, written in C and GMP.

    This code contains an implementation of the APR-CL primality proving algorithm. It is a conversion of the Java based APRT-CLE written by Dario Alpern, who had written his based on the UBASIC version from Yuji Kida. This version incorporates improvements based on Jason Moxham's APR-CL code, which greatly reduced run-time memory requirements. mpz_aprcl is meant to be compiled on systems that support C, GMP, and a 64-bit data type. It can prove the primality of numbers up to 6021 digits long...
    Downloads: 0 This Week
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  • 12
    fPotencia

    fPotencia

    Power flow library in C++

    .... fPotencia is programmed in C++, but my intention is to bring JAVA, C#, Python and perhaps MATLAB versions of it. All of them in native code and whenever possible with the same modular structure.
    Downloads: 0 This Week
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  • 13

    deapheap

    Deap is a doubly heap for both min and max number access.

    A deap is a doubly priority queue for efficient data operations. Both insertion and deletion operations take O(log(N)) time. Access of min or max takes constant time. It can be useful when both min and max are needed in the queue. It can also be used in situations where the number of items is too large and items with low priorities can be dropped with keep memory footprint small.
    Downloads: 0 This Week
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  • 14

    OnAGUI - Ontology Alignment GUI

    Software to help automatic or manual realisation of ontologi alignment

    This project has moved to https://github.com/lmazuel/onagui - OnAGUI (Ontology Alignment Graphical User Interface) is a project of alignment helper and viewer. You can edit ontology (SKOS, OWL) and edit alignment between concept of these ontologies. In addition, you can make automatic discovery of alignment, using different kind of algorithm. This work was initiated by Jean Charlet (http://www.limics.fr/index.php/annuaire), designed and developped by Laurent Mazuel on a post-doctoral...
    Downloads: 0 This Week
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  • 15
    ESTReMo

    ESTReMo

    An evolutionary simulator of transcription regulatory networks

    ESTReMo is a genetic algorithm-based simulator to explore the evolution of transcription factors and their binding motifs on realistic genomic backgrounds.
    Downloads: 0 This Week
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  • 16
    An easy-to-implement library that can assist Java developers in using the GeoHash algorithm in order to create geocodes based on custom latitude and longitude values. With the help of jGeohash, software developers will be able to quickly and easily generate a geohash code using user-defined latitude and longitude values. By using the GeoHash algorithm, the space can be divided into multiple grid shapes. This library is a basic implementation from the GeoHash algorithm written in the java...
    Downloads: 0 This Week
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  • 17
    BONESA
    BONESA is an open source, user-friendly interface for tuning the numerical parameters of metaheuristics. This package includes a multi-objective parameter tuning algorithm and visualizations of the performance landscape.
    Downloads: 0 This Week
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  • 18

    Evolutionary Nursery

    A simple genetic algorithm for numerical optimization

    Evolutionary nursery is a result for my passion for developing genetic algorithms. I implemented this simple GA in 2008. This is especially intended for numerical optimization problems.
    Downloads: 0 This Week
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  • 19

    Enfomi

    Encryption App

    Enfomi is a cross-platform standalone password-based encryption/decryption program that supports 27 algorithm variants (including AES 256bit). Archives can be self-decrypting, thus making it perfect for mobile applications.
    Downloads: 0 This Week
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  • 20
    backdup

    backdup

    BackDup is a Duplicity front-end for MacOS and Linux

    BackDup is a Duplicity (http://duplicity.nongnu.org/) front-end for MacOS and Linux written in Java. Duplicity creates bandwidth-efficient backup using the rsync algorithm. Mac OS users: please install Duplicity via macports (https://www.macports.org/) Linux users: install Duplicity via your package manager as usual.
    Downloads: 2 This Week
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  • 21
    JAS is a java library for creating agent based simulations. It features a discrete-event time engine, APIs for network simulation design, powerful yet easy-to-use implementations of Genetic Algorithms and Neural Networks.
    Downloads: 3 This Week
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  • 22
    Evokit is an integrated environment for developing evolutionary computation algorithms. It is built around Java and the Eclipse platform, and will support several different libraries including ECJ.
    Downloads: 0 This Week
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  • 23

    fastupload

    The fastest form-based file upload java programming component

    The component is based on RFC1867, written for java and j2ee development zone. It uses high performance byte-search algorithm to parse the submitted request, afterward save data into the file system. also, it provides a smart resolution to resolve the encoding issue for uploading text file.
    Downloads: 1 This Week
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  • 24
    PetriOpti

    PetriOpti

    Petri network optimization with Martinez-Silva algorithm

    A simply application in order to demonstrate Martinez-Silva optimization algorithm on Petri networks.
    Downloads: 0 This Week
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  • 25

    FamSeq

    Variant calling on the basis of pedigree information

    ... implementations of the Mendelian genetic model: the Bayesian network algorithm, Elston-Stewart algorithm and Markov chain Monte Carlo algorithm. To make the software efficient and applicable to large families, we parallelized the Bayesian network algorithm that copes with pedigrees with inbreeding loops without losing calculation precision on an NVIDIA® graphics processing unit.
    Downloads: 0 This Week
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