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Expediting cancer genetic and neurogenetic discovery through Bayesian Network Analysis of microarray data. Designed for genetics researchers, this takes in raw data (and a very small about of user input) and outputs reports usable by biologists.
Scripts to...
(1) format expression data from TCGA (Cancer Genome Atlas) for Cluster 3.0 & Java TreeView (heat mapping).
(2) generate list of potential miRNA clinical biomarkers/signatures based on survival analysis (kaplan-meier curve) statistics.
The Katsura tool overlays microarray gene expression data, proteomics, and similar biological data onto metabolic pathways. [Pathogen Functional Genomics Resource Center (PFGRC) @ J. Craig Venter Institute (JCVI)]
Waveform viewer. Inspired by 'gtkwave' and 'Dancer2' (Denso proprietary tool). Used primarily for embedded software development, this tool allows for visual signal comparison and analysis. Gaming style mouse + keyboard makes for fast/fun use.
The Forensics Data Identifier (FDI) is a tool which allows for large data files to be easily filtered for common forensically relevant data types.The tool was intended to speed up the ediscovery and analysis processes of the forensics investigation
ELIA(Eyegaze Language Integration Analysis) supports the analysis of eye-tracking data for studies in language processing. ELIA eases early analysis of data to enable iterative development of experiments in response to spoken language.
The TIMTAM (Target Information Management Tracking And More) system implements a secure knowledgebase supporting the management, tracking, and analysis of experimental data associated with structural biology projects.
Deploy in 115+ regions with the modern database for every enterprise.
MongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
CalPyLab is an open source data acquisition and (light) analysis software suite for scientific laboratories. The goal of this project is to provide a lightweight replacement for lab-view, to provide a quick and easy way to connect to your equipment.
Databases to aid Metabolomics projects providing storage functionality for raw and preprocessed data, and integration with existing dataanalysis environments.
UDAV is program for data arrays visualization based on MathGL library. It support wide spectrum of graphics, simple script language and visual data handling and editing.
Digitizer program to manually digitize data from graphic images. Allows for multiple calibrations and source image files for a single set of data series. Also includes an auto-export feature to streamline interoperability.
Justus is a tool set for Progress 4GL (ABL) Developers. It includes a simplified parser for 4GL, an API to load Profiler data and a Test Coverage Tool.
This RapidMiner-plugin consists of operators for feature selection and classification - mainly on high-dimensional (microarray-) data - and some helper-classes/operators.
Zwicker's Loudness Calculation (ISO532B) Tools. The project includes a loudness calculation program based on Zwicker's Method, and a WAV file analyzer generating data files for loudness calculation. Documentation and test files are also provided.
DIGIgrain is a general 3D data processing, data reduction program for 3D X-ray Diffraction Microscopy (3DXRD) and High-Energy Diffraction Microscopy (HEDM) measurements. It is designed to be used for analysis of both near-field and far-field images.
Import width files into MySQL, manipulate and export back to fixed width. Useful for health dataanalysis or *whatever*. Includes Thompson Reuters Care Discovery 3000 data file definition. Windows, OS X, Linux Requires PHP 5.3.x and MySQL 5.1.x
OpenForecast is a package of general purpose, forecasting models written in Java that can be applied to any data series. No knowledge of forecasting is required. Using this package, the most appropriate algorithm for your data will be selected.
This project is a fork of the CERN Program Library is a large collection of general purpose libraries/ This program is oriented to needs of a physics laboratory that is general mathematics, dataanalysis, detectors simulation, data-handling etc...
The project have moved and is alive at http://opencernlib.tuxfamily.org/
Flow Investigation using N-Dimensions (FIND) is a program designed for analysis and visualization of Flow Cytometry data. FIND focuses specifically on automated population discovery (clustering) methods. The project targets both users and developers.
Classes for manipulating data used in various methods applicable for Multi Criteria Decision Analysis.
Also transforms data in order to obtain results of the analysis.