Showing 493 open source projects for "k-meleon"

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  • 1
    PEG.js

    PEG.js

    PEG.js is a parser generator for JavaScript

    PEG.js is a simple parser generator for JavaScript that produces fast parsers with excellent error reporting. You can use it to process complex data or computer languages and build transformers, interpreters, compilers and other tools easily. PEG.js is still very much work in progress. There are no compatibility guarantees until version 1.0. Based on parsing expression grammar formalism, more powerful than traditional LL(k) and LR(k) parsers. Usable from your browser, from the command line...
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  • 2
    GFP- GAKNN
    GAKNN is a data mining software for gene annotation data. GAKNN is built with k- Nearest Neighbour algorithm optimized by the genetic algorithm. Gene annotation datasets saved under .csv or .arff formats with Gene Ontology or FunCat categorization can use GAKNN to predict gene functions.
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  • 3

    E-Plater

    The firmware for the PIC18F2XK22 to do pulsed electroplating

    "E-plater" is a device that was specially developed by Engenharia Caseira (engenhariacaseira.com.br) to make pulsed and reversed pulsed electroplating (PED). Research shows that molecules on the surface of electrically deposited material using direct current are sometimes disorganized which can result in uneven surface and color. It is possible to control the composition and thickness of the deposited layer in an atomic order by configuring the amplitude and width of a pulse. The...
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  • 4
    Hyacc is an efficient and practical Yacc/Bison-compatible full LR(1)/LALR(1)/LR(0) and partial LR(k) parser generator in ANSI C based on Knuth and Pager's LR(1) algorithms. Generated parser can be used in open-source or commercial software.
    Downloads: 1 This Week
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  • 5
    Grid-based Coupled Electron and Electromagnetic field Dynamics (GCEED) is an open-source software package for massively parallel first-principles calculations of electron dynamics in real time and real space. The program codes are written in the Fortran 90/95 language with MPI and OpenMP. Time dependent density functional theory (TD-DFT) calculations can be performed on 100,000 CPU cores of K Computer with high parallel efficiency.
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  • 6
    MRiLab

    MRiLab

    A Numerical MRI Simulation Platform

    The MRiLab project is moving to GitHub, the latest version can be obtained from https://leoliuf.github.io/MRiLab/ The MRiLab is a numerical MRI simulation package. It has been developed and optimized to simulate MR signal formation, k-space acquisition and MR image reconstruction. MRiLab provides several dedicated toolboxes to analyze RF pulse, design MR sequence, configure multiple transmitting and receiving coils, investigate magnetic field related properties and evaluate real-time imaging...
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    Downloads: 15 This Week
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  • 7

    Multi-scaleMaskingofPoints

    Subjects point geographic data sets to masking at different resolution

    See: Clarke, K. C. (2015) Multi-scale Masking of Point Geographic Data. International Journal of Geographical Information Science. vol. 29. (accepted)
    Downloads: 0 This Week
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  • 8
    AutoVPN

    AutoVPN

    Create on demand disposable OpenVPN endpoints on AWS

    Script that allows the easy creation of OpenVPN endpoints in any AWS region. Creating a VPN endpoint is done with a single command that takes ~3 minutes. It will create the proper security groups. It spins up a tagged ec2 instance and configures OpenVPN software. Once the instance is configured an OpenVPN configuration file is downloaded and ready to use. There is also functionality to see which instances are running in which region and the ability to terminate the instance when done....
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  • 9
    YoutubeDownloader - MP3 Converting

    YoutubeDownloader - MP3 Converting

    Complete Webpage in PHP & Perl for Youtube Downloader Web Projekt

    Complete new web project from me from 2014 realizing a youtube video downloader inclusive mp3 converting process. The project is coded in php, perl, jquery, ajax and css3. the web design is simple, but you can use it to set up new content. i dont publish the songtext content, but i give you all 30 perl created crawlers that extract content from lyrics and songtext webpages via wget. perl crawlers will then parse out the songtext content out of it. (c) Copyright: 2014 Sebastian...
    Downloads: 3 This Week
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  • 10
    Suite of tools for DNA sequence analysis - searching (EST, mRNA, sequencer reads); aligning (ESTs, mRNA, whole genome); and analysis (repeats, kmers).
    Downloads: 1 This Week
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  • 11
    root locus of g(s) for k>0 with Monte Carlo method
    Downloads: 0 This Week
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  • 12

    Opera

    An optimal genome scaffolding program

    Opera (Optimal Paired-End Read Assembler) is a sequence assembly program (http://en.wikipedia.org/wiki/Sequence_assembly). It uses information from paired-end or long reads to optimally order and orient contigs assembled from shotgun-sequencing reads. An updated version called OPERA-LG has been re-engineered with features for the assembly of large and complex genomes. Song Gao, Denis Bertrand, Burton K. H. Chia and Niranjan Nagarajan. OPERA-LG: efficient and exact scaffolding of large...
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  • 13

    [C#] Who Is Locking

    WhoIsLocking is a C# console application to detect apps locking a file

    Who Is Locking is a file utility that detects which processes is locking (currently using) the file so that you can successfully delete, move, rename, whatever you want to do with the file. Command Line Usage: WhoIsLocking [commands] [file name] Console Command Line Arguments: -k - Kill (or stop) processes that is locking the file. -d - Deletes the file (implies -k). -r - Deletes the file on next restart of your PC (implies both -k and -d commands). Who Is Locking may need...
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  • 14
    CoSA (Concurrent Subtractive assembly) is a package to detect differential short sequencing reads by comparing two groups of metagenomes on the basis of kmer frequencies. KMC 2 is one of the fastest k-mer counting implementations, so we employ KMC 2 for k-mer counting in our package. Because in many cases we need to compare tens of or even hundreds of samples, we adopt the concurrent hash table in Libcuckoo for efficient k-mer counting. Once the differential reads are extracted, they can...
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  • 15
    • Objective: Design a Web-based software that predicts the appearance of a new link between two nodes in a social network • Datasets: Dolphin Social Network: https://networkdata.ics.uci.edu/data.php?id=6 • Requirement: Implement the K-NN Algorithm (Section 6.9.1, page 348)
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  • 16

    PB-sQF_BacterialTyping

    Bacterial Typing from either assembled or raw short reads file

    Probability Binning - signature Quadratic Form, PB-sQF, types unknown sequence to one of the 628 bacterial library genomes which gives the smallest test statistics thus most similar library strain. The input file is the k-mer counts of the unknown assembled genome sequence or raw short reads file in decimal format generated by KAnalyze developed by P. Audano et al. (https://sourceforge.net/projects/kanalyze/). The download included the library index, the library name and sample unknowns.
    Downloads: 0 This Week
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  • 17
    This my Site full of Stuff for my favourite and in my opinion the best Puppy Linuxes Ever! This site is inspired by the work of Tuxtoo and the 412Collection. Remembering also Barry K for creating Puppy Linux in the first place and all those others who have worked on it. Many of the programs on this site work with an unmodified 412/421 and Slaxerpup install. for more info on .pets check this wiki for Murga Forum thread link: https://sourceforge.net/p/old412forever/wiki/Links%20to...
    Downloads: 0 This Week
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  • 18
    Density-ratio based clustering

    Density-ratio based clustering

    Discovering clusters with varying densities

    ... densities that would otherwise impossible had the same algorithm been applied to the unscaled dataset. Reference: Zhu, Y., Ting, K. M., & Carman, M. J. (2016). Density-ratio based clustering for discovering clusters with varying densities. Pattern Recognition. http://www.sciencedirect.com/science/article/pii/S0031320316301571
    Downloads: 0 This Week
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  • 19
    Mass-based dissimilarity

    Mass-based dissimilarity

    A data dependent dissimilarity measure based on mass estimation.

    This software calculates the mass-based dissimilarity matrix for data mining algorithms relying on a distance measure. References: Overcoming Key Weaknesses of Distance-based Neighbourhood Methods using a Data Dependent Dissimilarity Measure. KDD 2016 http://dx.doi.org/10.1145/2939672.2939779 The source code, presentation slide and poster are attached under "Files". The presentation video in KDD 2016 is published on https://youtu.be/eotD_-SuEoo . Since this software is licensed...
    Downloads: 1 This Week
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  • 20

    Beeline Fast +

    Kernel source code

    Kernel source code used in Beeline Fast +
    Downloads: 0 This Week
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  • 21
    Spatial C++ Library

    Spatial C++ Library

    Library of generic, k-d tree multi-dimensional containers

    Spatial is a generic header-only C++ library providing multi-dimensional in-memory containers, iterators and functionals. Spatial is a general purpose library with good overall performance thanks to its self-balancing k-d tree containers. Spatial makes it easy to search for nearest neighbors, orthogonal ranges, or perform ordering of objects in any number of dimensions. Spatial's design borrows heavily from the STL, and strives to follow it's elegant interface; therefore Spatial's...
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  • 22

    runjags

    The 'runjags' R package and standalone JAGS extension module

    This package provides high-level interface utilities for MCMC models via Just Another Gibbs Sampler (JAGS), facilitating the use of parallel (or distributed) processors for multiple chains, automated control of convergence and sample length diagnostics, and evaluation of the performance of a model using drop-k validation or against simulated data. Template model specifications can be generated using a standard lme4-style formula interface to assist users less familiar with the BUGS syntax...
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  • 23
    .... In case you use the package in your work, we do appreciate a citation to the publications below. Citation: Yadav B, Peddinti G, Pemovska T, Khan SA, Szwajda A, Tang J, Wennerberg K and Aittokallio T. From drug response profiling to target addiction scoring in cancer cell models. (Submitted)
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  • 24
    Virtual Math Teams
    The Virtual Math Teams (VMT) Project (vmt.mathforum.org) at the Math Forum enables K-12 math collaborative learning, professional development of educators, & group cognition research. VMT is now integrated with GeoGebra (http://www.geogebra.org/).
    Downloads: 0 This Week
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  • 25
    KAnalyze

    KAnalyze

    DNA/RNA Sequence K-mer Toolkit

    KAnalyze is a Java toolkit designed to convert DNA and RNA sequences into k-mers. It is both a command line application and an API.
    Downloads: 0 This Week
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