Search Results for "data analysis" - Page 50
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Showing 2661 open source projects for "data analysis"
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NetFireCoRE
Network Firewall Linux Kernel Module with Conflict Resolution Engine
We implement an open source conflict resolution framework that consists of a user-space C application that automatically resolves firewall rules anomalies, and b) a generic tree (called policy tree), implemented as a Linux kernel module which maintains the resolved firewall rules and enables the necessary hooks to netfilter for matching incoming (or outgoing) network packets. Tree-based data structures offer improved efficiency compared to traditional access control lists (e.g. iptables or nftable maps), especially for large systems with a huge number of rules. Preliminary analysis from our implementation on ARM-based embedded systems examines efficiency and scalability of our framework. To reference this work: A. Papagrigoriou, P. ... -
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X-SOCS
X-ray Strain Orientation Calculation Software
The X-ray Strain Orientation Calculation Software (X-SOCS) is a user-friendly software, developed for automatic analysisof 5D sets of data recorded during continuous mapping measurements. X-SOCS aims at retrieving strain and tilt maps of nanostructures, films, surfaces or even embedded structures. For more information: http://scripts.iucr.org/cgi-bin/paper?S1600576714004506 To download the latest version of XSOCS (D. Naudet, T. Vincent, M.I. Richard, G. Chahine), follow the instruction in the following link: https://gitlab.esrf.fr/kmap/xsocs You can find on youtube video tutorials explaining the main steps to follow for a standard KMAP data analysis. ... -
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CSBB-v2.0
Computational Suite for Bioinformaticians and Biologists
CSBB is a command line based bioinformatics suite to analyze biological data acquired through varied avenues of biological experiments. CSBB is implemented in Perl, while it also leverages the use of R, java and ruby in background for specific modules. Major focus of CSBB is to allow users from biology and bioinformatics community, to get benefited by performing down-stream analysis tasks while eliminating the need to write programming code. -
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Simple-Scrape is a simple web-scraping library that allows for programmatic access to HTML code. No further techniques are needed and the library is very compact and thus easy to use.
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ImagingAnalysis
Direct tissue-level image quantification package for Mathematica
ImagingAnalysis is a Mathematica package that performs grid-based analysis of time-lapse imaging data saved in a sequence of TIFF files. This package requires Mathematica 7.0. Revised on 14 May 2017: Bugs are fixed and incompatibility issues are resolved. The current version runs on Mathematica 11. -
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vbSPT
variational Bayes single particle tracking
vbSPT is an acronym for variational Bayes single particle tracking, a software package for hidden Markov Model analysis of single particle tracking data, primarily for biophysical applications. Journal reference: Extracting intracellular diffusive states and transition rates from single-molecule tracking data. Fredrik Persson, Martin Lindén, Cecilia Unoson & Johan Elf. Nature Methods (2013). doi:10.1038/nmeth.2367 http://www.nature.com/nmeth/journal/vaop/ncurrent/abs/nmeth.2367.html -
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AlienVault OSSIM
Open Source SIEM
OSSIM, AlienVault’s Open Source Security Information and Event Management (SIEM) product, provides event collection, normalization and correlation. For more advanced functionality, AlienVault Unified Security Management (USM) builds on OSSIM with these additional capabilities: * Log management * Advanced threat detection with a continuously updated library of pre-built correlation rules * Actionable threat intelligence updates from AlienVault Labs Security Research Team * Rich... -
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VeriSiMPL
Verification via biSimulations of Max-Plus-Linear models
This toolbox is used to generate finite abstractions of autonomous Max-Plus-Linear (MPL) systems over R^n. Abstractions are characterized as finite-state Labeled Transition Systems (LTS). The LTS finite abstractions are shown to either simulate or to bisimulate the original MPL system. LTS models are to be verified against given specifications expressed as formulae in Linear Temporal Logic (LTL) and Computation Tree Logic (CTL). The toolbox intends to leverage the NuSMV model checker. Models... -
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Lattice Miner is a data mining prototype for creating, visualizing and exploring concept (Galois) lattices. It allows the generation of formal concepts and association rules.
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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All future developments will be implemented in the new MATLAB toolbox SciXMiner, please visit https://sourceforge.net/projects/scixminer/ to download the newest version. The former Matlab toolbox Gait-CAD was designed for the visualization and analysis of time series and features with a special focus to data mining problems including classification, regression, and clustering.
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ChiPSeqPair
Match Chip-Seq Data with different features
1. Match Chip-Seq Data with different features 2. Match Chip-Seq Data with input data 3. Find Seq information to facilitate download and analysis of Chip-seq data -
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The increasing demand of next-generation sequencing (NGS) studies has remarked the necessity of integrated and reliable pipelines to analyse deep-sequencing experiments in an efficient way. We present RUbioSeq+, a stand-alone and multiplatform application for the integrated analysis of NGS data. More specifically, our software implements pipelines for the analysis of single nucleotide and copy-number variation, bisulfite-seq and ChIP-seq experiments using well-established tools to perform these common tasks. RUbioSeq+ is free and includes all the core functionalities implemented in the original release of RUbioSeq (v3.2.1) but, also, outperforms and expands RUbioSeq capabilities supporting the parallelized analysis of full genomes in computing farms. ...
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epi-ACE is a tool for examining the hierarchical data structure of small epidemiological data sets. It provides facilities to scale attributes, import data and draw 3D lattices. Its mathematical foundations are in Formal Concept Analysis.
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wimm
Cross Platform application that allows you to track daily spending in
'Where is My Money' it's open source, cross platform software to track daily spendings. Spendings are grouped into callendar-like view for easy access and analyse. Application builds summury based on added spendings and shows how many was spent per week and per month. All data stored on local computer into user's directory as simple json file. -
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Amon
Amon is a modern server monitoring platform
Amon is a monitoring tool that provides real-time insights into server performance, application logs, and system metrics. -
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QuickRNASeq
A pipeline for large scale RNA-seq data analysis
We have implemented QuickRNASeq, an open-source based pipeline for large scale RNA-seq data analysis. QuickRNASeq takes advantage of parallel computing resources, a careful selection of previously published algorithms for RNA-seq read mapping, counting and quality control, and a three-stage strategy to build a fully automated workflow. We also implemented built-in functionalities to detect sample swapping or mislabeling in large-scale RNA-seq studies. -
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IOA AM code
Implementation of the core routine for AM analysis from the IOA AMWG
...It should not be taken as agreement from the IOA or the AMWG that any results produced by this code are recommended or agreed. The example software does not represent an analysis method and requires correct inputs parameters and data, and interpretation of the results. All users should have a suitable understanding of the IOA AMWG document on which this code is based. No user support is offered, although feedback may may be directed to WTAMCONSULT (at) IOA.ORG.UK. No responses, however, can be guarantee -
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pair-trading-view
Pair Trading View - .NET application for visual analysis of synthetic
Pair Trading View - .NET application for visual analysis of synthetic financial instruments based on statistical models. https://github.com/dv-lebedev/pair-trading-view Look for binaries in "pair-trading-view\PairTradingView.WinFormsApp\bin\Debug" folder. -
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Echo Mirage
Hook into application processes and monitor network interactions
...Echo Mirage aids in thorough security analysis by allowing testers to identify potential weaknesses and simulate attacks on application communication. -
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Restangular
AngularJS service to handle Rest API Restful Resources
Restangular is an AngularJS service that simplifies common GET, POST, DELETE, and UPDATE requests with a minimum of client code. It's a perfect fit for any WebApp that consumes data from a RESTful API. Note This version of Restangular only supports Angular 1. For an Angular 2+ version of Restangular, check out ngx-restangular. It's a separate project with different maintainers, so issues regarding ngx-restangular should be reported over there. Learn Restangular! Try the live demo on plunkr.... -
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Investing
Investing Returns on the Market as a Whole
This repository, owned by the user zonination (Zoni Nation), presents a data visualization and analysis project on long-term returns from broad stock market indexes, especially the S&P 500. The author gathers historical price data (adjusted for inflation and dividends) and computes growth trajectories under a “buy and hold” strategy over decades. The key insight illustrated is that over sufficiently long holding periods (e.g. 40 years), the stock market stabilizes and nearly always yields positive returns, even accounting for extreme market crashes and recessions. ... -
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CamBA is a Linux package for statistical analysis, by script/GUI, of neuroimaging data (fMRI/sMRI), developed at the Brain Mapping Unit, University of Cambridge. Non-parametric permutation-based statistics. Input images: 4D NiFTI files, output: HTML/
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bmon
Bandwidth monitor and rate estimator
bmon (Bandwidth Monitor) is a command-line network monitoring tool that provides detailed bandwidth statistics for network interfaces. -
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Discharge
Fourier analysis of discharge data in R
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SmartRoot
Semi-automated root image analysis software
...SmartRoot is an operating system independent freeware based on ImageJ and uses cross-platform standards (XML, SQL, Java) for communication with data analysis softwares. To cite us: Guillaume Lobet, Loïc Pagès and Xavier Draye. A Novel Image Analysis Toolbox Enabling Quantitative Analysis of Root System Architecture. 2011 Plant Physiology, Vol. 157
