Showing 3037 open source projects for "mind-mapping"

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  • 1

    Re-Annotator

    Re-annotates Microarray Probes

    The microarray technology is an established approach for high throughput gene expression analysis. An accurate mapping between array probes and the genes that they are targeting is essential for generating accurate biological findings. The manufacturers typically provide such annotation tables. However, these tables rely on older genome and transcriptome versions that differ substantially from the current state-of-the-art sequence databases.
    Downloads: 1 This Week
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  • 2
    de novo assembly validation

    de novo assembly validation

    de novo clustering of assembled contigs into two groups

    ...For non-model organisms, without reference genome, it is very hard to state that which contig is correct and which is not. With this project, the proposed unsupervised clustering method (K-means) based clustering is done utilizing the depth of reads mapping based coverage information. The coverage based features are used for clustering. The same can also be found at SCBB software page (http://scbb.ihbt.res.in/SCBB_dept/Software.php).
    Downloads: 0 This Week
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  • 3
    Game Backup Monitor

    Game Backup Monitor

    Automatically backup your saved games with optional cloud support.

    ...GBM can be used on a single computer, or on multiple computers to effectively add cloud support to any game or application. Game Backup Monitor was designed with gaming in mind, but it can be used to monitor any application on your PC!
    Downloads: 0 This Week
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  • 4
    Geothek
    An extension to the desktop globe marble, providing the following additional modules: pixel maps, statistics module, 3D view
    Downloads: 0 This Week
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  • 5

    MutAid

    MutAid: Sanger and NGS based pipeline for mutation screening.

    ...MutAid can analyze and interpret raw sequencing data produced by Sanger or several NGS sequencing platforms. It performs format conversion, base calling, quality trimming, filtering, read mapping, variant calling, variant annotation and co-analyze Sanger and NGS data under a single platform. It is capable of analyzing reads from multiple patients in a single run to create a list of potential disease causing base substitutions as well as deletions and insertions. MutAid has been developed for expert and non-expert users and supports four sequencing platforms (Sanger, Illumina, 454 and Ion Torrent) and five read mappers including BWA,TMAP, Bowtie,Bowtie2 and GSNAP and four variant callers
    Downloads: 0 This Week
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  • 6
    KObject java

    KObject java

    Java EE MVC2 framework

    MVC2 Client and Server framework for Java EE with ORM functionality, templates, code generation for rich client
    Downloads: 1 This Week
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  • 7

    PyWham

    Python implementation of the Weighted Histogram Analysis Method (WHAM)

    Latest version is 1.2, released Mar 12, 2016 PyWham is a flexible and fully customizable implementation of the Weighted Histogram Analysis Method (WHAM) in Python 2. PyWham has been carefully designed with flexibility in mind. Some of its features are: (1) any number of reaction coordinates, (2) any form of potential, (3) compatibility with Python syntax and Python math module and (4) support for user-defined functions. Knowledge of Python is not required.
    Downloads: 0 This Week
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  • 8

    smartsbc

    Smart Session Border Controller

    SmartSBC (c) is a general purpose security framework for Session Border Controlling (SBC) keeping in mind two general considerations: a) be smart, to be a step ahead firewalling techniques and to introduce to dynamic adaptation with complex and variable threat heuristics policies. b) be pluguble, to allow more protection strategies to be available and focused on random threats. 2. Design SmartSBC (c) is a multithreaded service which contains serverla embeded and pluguble modules: a) Realtime Log file mining module. ...
    Downloads: 0 This Week
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  • 9
    OpenCPN: A concise ChartPlotter/Navigator. A cross-platform ship-borne GUI application supporting * GPS/GPDS Postition Input * BSB Raster Chart Display * S57 Vector ENChart Display * AIS Input Decoding * Waypoint Autopilot Navigation
    Downloads: 30 This Week
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  • 10
    संस्कृति Sanskriti

    संस्कृति Sanskriti

    Sanskrit to English Dictionary Android application .

    It is sanskrit ,the mother of all languages to english offline dictionary for android. vedas are only texts which help us understand divinity in any language, in bhagavata krishna says : "Just as a spider brings forth from its heart its web and emits it through its mouth, the Supreme Personality of Godhead manifests Himself as the reverberating primeval vital air, comprising all sacred Vedic meters and full of transcendental pleasure. Thus the Lord, from the ethereal sky of His heart, creates the great and limitless Vedic sound by the agency of His mind, which conceives of variegated sounds such as the sparśas. The Vedic sound branches out in thousands of directions, adorned with the different letters expanded from the syllable om: the consonants, vowels, sibilants and semivowels. The Veda is then elaborated by many verbal varieties, expressed in different meters, each having four more syllables than the previous one...
    Downloads: 0 This Week
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  • 11

    Asterisk CDR import

    Simple web interface for mapping CDR from VoIP provider to Asterisk

    This is a simple tool to map information for the cost of phone calls given by your VoIP provider, to the call log inside your Asterisk. As a result, you will know how much each of your employees has spent for phone calls. Additionally, this tool shows information about the assigned DID and CLIP numbers in Asterisk. This is helpful to identify obsolete, duplicate and multiple assignments.
    Downloads: 0 This Week
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  • 12

    Trinculo

    Flexible tools for multinomial association

    An efficient toolkit for carrying out genetic association for multi-catagory phenotypes. Implements multinomial and ordinal association incorporating covariates, conditional analysis, empirical and non-emperical priors and fine-mapping.
    Downloads: 3 This Week
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  • 13
    olego

    olego

    OLego – short or long RNA-seq read mapping to discover exon junction

    OLego is a program specifically designed for de novo spliced mapping of mRNA-seq reads. OLego adopts a seeding and extension scheme, and does not rely on a separate external mapper. It achieves high sensitivity of junction detection by using very small seeds (12-14 nt), efficiently mapped using Burrows-Wheeler transform (BWT) and FM-index. This also makes it particularly sensitive for discovering small exons.
    Downloads: 0 This Week
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  • 14

    TrailMap

    A tile-based map viewer with support for GPX files.

    TrailMap is a tile-based online and offline map viewer. Multiple map tile sources are supported by adapters. Currently supported features: - GPS positioning (on Android only) - Points-of-Interest from GPX and LMX files - OpenStreetMap maps - MML maps (covers only Finland) from https://tiedostopalvelu.maanmittauslaitos.fi/tp/kartta
    Downloads: 0 This Week
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  • 15

    lmdb++

    C++11 wrapper for the LMDB embedded B+ tree database library.

    This is a comprehensive C++ wrapper for the LMDB embedded database library, offering both an error-checked procedural interface and an object-oriented resource interface with RAII semantics. • Designed to be entirely self-contained as a single <lmdb++.h> header file that can be dropped into a project. • Implements a straightforward mapping from C to C++, with consistent naming. • Provides both a procedural interface and an object-oriented RAII interface. • Simplifies error handling by translating error codes into C++ exceptions. • Carefully differentiates logic errors, runtime errors, and fatal errors. • Exception strings include the name of the LMDB function that failed...
    Downloads: 0 This Week
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  • 16
    OverServer

    OverServer

    Simple meta-server for locating other multiplayer servers

    ...OverServer tries not to violate this strength by keeping the query and response length very low to cut down on overhead from running the metaserver. I designed OverServer with a few lessons in mind from Valve and Won's metaserver setup for Half-life. It is at least somewhat resistant to attack through a challenge-response system for incoming requests. I also wanted the tool to be very simple to "snap in" to an existing application.
    Downloads: 0 This Week
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  • 17

    JMapViewer

    Java Swing component for integrating OSM maps into your Java app.

    This project offers the Mavenized format of the official "JMapViewer" project. Official project code on: https://trac.openstreetmap.org/browser/subversion/applications/viewer/jmapviewer?order=name Please, note that no development is performed in this SVN, just contains Maven artifact of official releases (starting from 1.14 version) If you want to give it a try, download code and run the Demo: > mvn compile package > cd target > java -jar JMapViewer-1.14.1-Demo.jar
    Downloads: 8 This Week
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  • 18
    The JTS Topology Suite is an API for modelling and manipulating 2-dimensional linear geometry. It provides numerous geometric predicates and functions. JTS conforms to the Simple Features Specification for SQL published by the Open GIS Consortium.
    Downloads: 7 This Week
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  • 19
    jqueryrotate

    jqueryrotate

    Plugin to rotate images by any angle cross-browse with animation

    ...It uses CSS3 where applicable and falls back to a CANVAS (old Firefox, some less-known browsers) or VML (IE6) solution where possible. It also gives a simple interface to animate rotation. Keep in mind that the primary usage of this plugin is to only rotate "IMG" elements, however the experimental version of the plugin (ver.3) also rotates other elements (yet does not support so many older browsers).
    Downloads: 0 This Week
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  • 20
    As of 03/2017, this project is moved to GitHub: https://github.com/cyberborean/rdfbeans ---- A simple Java-to-RDF databinding framework for transparent mapping JavaBean-like objects to RDF resources and vice versa.
    Downloads: 0 This Week
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  • 21
    EasyTerm

    EasyTerm

    Serial Port Terminal

    EasyTerm strives to become like some of the other great serial port terminal utilities that currently exist with one great improvement in mind... cross platform functionality!
    Downloads: 10 This Week
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  • 22

    Visual NMS

    Visual Network Management System

    ...It includes Layer 2 autodiscovery based on LLDP and other discovery protocols (Cisco's CDP, Extreme Networks' EDP, etc.). Other features include: real time SVG graphs on links, web2cli engine (AJAX to Telnet/CLI), editable maps, auto layout (based esentially on GraphViz), VLAN mapping (work in progress) based on SNMP.
    Downloads: 0 This Week
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  • 23
    Ultimate 1MB (U1MB) Rom Builder

    Ultimate 1MB (U1MB) Rom Builder

    Rom Builder Utility for Atari 8 bit Ultimate1MB upgrade

    This utility is used to create/maintain ROM images for flashing to the Ultimate 1MB device. It's main purpose is to customize your U1MB device to your needs.
    Downloads: 0 This Week
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  • 24
    Skill Map

    Skill Map

    A visualization of programmer skill maps

    Skill‑Map is an open-source, collaborative project—originating from Geekbang—offering a structured visualization of programmer skill maps across domains like AI, front-end, backend, architecture, DevOps, and more. It serves as a navigable resource to organize learning paths and essential knowledge areas. Covers areas like AI, big data, architecture, frontend, backend, DevOps, testing, etc. Visual representation of programming and IT skill domains. Encourages community collaboration and...
    Downloads: 0 This Week
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  • 25
    Atlas2
    Atlas is a suite of variant analysis tools specializing in the separation of true SNPs and insertions and deletions (indels) from sequencing and mapping errors in Whole Exome Capture Sequecing (WECS) data.
    Downloads: 0 This Week
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