Search Results for "fitting" - Page 4
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Showing 156 open source projects for "fitting"
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SWRC Fit is a scientific tool for hydrologist. It fits several soil hydraulic models to measured soil water retention data by nonlinear fitting. It is written in numerical calculation language GNU Octave. Web interface is also available.
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EDM Calibration Baseline Fitting
EDMFit is an adjustment tool to estimate EDM calibration parameters.
An EDM calibration baseline is used to derive specific instrument errors of the electronic distance measurement (EDM) unit of a total station. EDMFit is a simple adjustment tool to estimate the EDM calibration parameters (addition constant and/or scale parameter). The adjustment process is according to ISO 17123-4. The parameters are checked for significance, to avoid an overestimation. Based on two classical hypothesis testing, EDMFit provides a reliable outlier detection. For... -
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Savuka-VirtualBox
Virtual Box VDI of SliTaz Linux with Savuka installed and configured
Savuka global analysis software (www.osmanbilsel.net) is installed and configured in a light version of SliTaz linux (www.SliTaz.org). root name: root root password: root username: tux password: root Instructions: -Download and install 7zip (www.7-zip.org) -Extract files to HDD -Install included VirtualBox (not tested on other versions, but shouldn't matter) -Within VirtualBox make a new machine ----Machine/New --------Name: Savuka / Type: Linux / Version: Other Linux... -
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XmgFit
A wrapper to use Xmgrace's curve fitting capability on the shell.
XmgFit is a wrapper for Xmgrace (*) allowing to use comfortable the non-linear curve fitting capability of Xmgrace from the command line. Therefore the capabilities are limited by xmgrace. Please refer to the xmgrace users guide for more details. It is also handy to incorporate in shell scripts. The -s or --scripty option returns all result values xmgrace provide in an EVALuable format to make them easy available in shell scripts. *) http://plasma-gate.weizmann.ac.il/Grace/ -
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MDA
Molecular Dynamics Analyzer (MDA)
... by the astigmatism. It does not require additional experimental effort for the user and imaging can directly be started once interesting regions in the sample have been identified. MDA is written in MATLAB and comes with a graphical user interface. The particle fitting routine is provided by an external library written in C. The results can be exported into the Matlab Workspace or the trackID, frameID and xyz coordinates are saved into files. -
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GADfit
Global nonlinear optimization with automatic differentiation
NOTE: Development continued at GitHub! Current version is higher than 1.2.0. GADfit is a Fortran implementation of global nonlinear curve fitting, based on a modified Levenberg-Marquardt algorithm. Global fitting refers to fitting many datasets simultaneously with some parameters shared among the datasets. The fitting procedure is very fast and accurate thanks to the use of automatic differentiation. The model curves (fitting functions) can be of essentially arbitrary complexity... -
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rarFit
Maximum Likelihood fitting programme using ROOT and RooFit
A maximum likelihood fitting package based on ROOT/RooFit for HEP. The fitting is driven by a text file and includes the following main options: 1) fitting, plotting and extraction of PDFs; 2) fitting of maximum likelihood models; 3) creation of projection and sPlot plots; 4) scanning about maximum likelihood minima; 5) combination of maximum likelihood curves with systematic errors for extraction of significance and combined errors; 6) toy studies; 7) means and pulls on fitted observables... -
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Guard
Software which will give real time security
Guard is a software which provides with real time security other than in-system security. It prevents any unauthorized person to handle your computer. It also monitors Guest users activity and instead of doing itself , Guard saves screen snapshots while Guest user operates your computer and allows to interpret the images later on for deciding whether the Guest User has done anything "SHOULD NOT" things in your computer. Guest Mode Startup Locker Process Locker Startup Login... -
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ASM
Java API for WS-Pgrade/gUSE
Users of WS-PGRADE define their applications as workflows. They can share their applications using its internal repository solution. Hence users can import, parameterize and execute workflows developed by others. Using this idea, Application Specific Module (ASM) offers a Java API for all of these functionalities to develop Application Specific Portlets fitting to the end-users' needs and hiding all the complex mechanisms of the underlying system. Science Gateways developed using ASM... -
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GeoStrain
Geodynamic strain analysis software
The main purpose of the software is to calculate the crustal strain rates using the least-squares collocation method. The software is able to simultaneously determine the signal and noise of the velocities at the observation points with the best possible removal of the observation errors, or at any other position with no velocity observation. Furthermore, the software can calculate strain and rotation rate tensors at points of interest, including observation points, grid points or points... -
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pure python polyfit
python2/3: compute polyfit (1D, 2D, N-D) without thirdparty libraries
python2/3: compute polyfit (1D, 2D, N-D) without any thirdparty library like numpy, scipy etc. also can be used for least squares solution computation and for A=QR matrix decomposition. Tested with python 2.7 and 3.4 Consider donating to this project: https://sourceforge.net/p/purepythonpolyfit/donation For a Sample use, refer to the WIKI -
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fitGCP
Fitting genome coverage distributions with mixture models
... this information accessible can improve the quality of sequencing experiments and quantitative analyses. fitGCP is a framework for fitting mixtures of probability distributions to genome coverage profiles. Besides commonly used distributions, fitGCP uses distributions tailored to account for common artifacts. The mixture models are iteratively fitted based on the Expectation-Maximization algorithm. Please find the accompanying paper here: http://dx.doi.org/10.1093/bioinformatics/btt147 -
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A free viewer of matrix data (e.g. PIXE, RBS,PIGE, XRF mapping) developped with Labview. compatible input format: output files of the batch Fitting from PyMCA software (.dat) or saved image in EDF format (.edf) (PyMCA & AGLAEMap)
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Cognitive Stability and Flexibility FIT
GPU Accelerated Fitting of Behavioral Data by a Physiological Model
Using the NVIDIA-CUDA framework, mcmc_min is able to efficiently sample the Bayesian posterior distribution over the parameters of a physiologically derived model of a task-switching and distractor inhibition paradigm. The model features a working-memory module, implementing the currently active task rule in terms of a two-dimensional stochastic dynamical system with three attractor states (rule 1, rule 2, spontaneous). The working memory module is given inputs representing the task cue in... -
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MRI-PDQ:Phase Detection & Quantification
Detect sphere-shaped paramagnetic deposits in MRI datasets
Moved to http://parkermills.github.io/MRI-PDQ/ -
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Threadsafe C library for genetic optimisation (differential evolution) of data. Most often used for least squares fitting. But you can supply your own fit function and your own cost function.
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QUDeX-MS
Hydrogen/deuterium exchange estimation for isotopic fine structure MS
... of deuterium incorporation from a spectrum with isotopic fine structure resolved. Given a peptide sequence or elemental formula, the distribution of deuterium-associated mass-to-charge ratios is calculated based on a particular charge state corresponding to the molecular species resolved in an input mass spectrum. Peaks in the input mass spectrum fitting within bins corresponding to these values are used to determine the distribution of deuterium incorporated. -
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PMM-Lab Lite
Toolkit for Predictive Microbial Modeling
To install PMM-Lab Lite on Linux or Mac OS X follow the instructions at https://sourceforge.net/p/pmmlablite/wiki/Installation/. The Mac OS X version relies on an existing, 64 bit version of Java 6. Some of the things you can do with PMM-Lab Lite: • Import Data from XLS, etc. • Fitting primary / secondary models to data (two-step-fit) • Fitting global models to data (one-step-fit) • Using your own formulas (Formula Editor) • Do predictions with your models • Export results to XLS... -
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Fountain Libre Office Tools
Fountain Tools for LibreOffice easily format professional screenplays.
Fountain Tools for LibreOffice is a freeware toolset to easily create professionally formatted screenplays "from scratch," sourced from platform-independent and future-proof fountain text files (or, a subset of fountain), including proper handling of elements that span pages (no widows or orphans--it's a layout thing), and formatting which so closely mimics the better "bang for your buck" layout of Movie Magic Screenwriter that no reader will be the wiser. In other words, it may shorten your... -
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PrivLocal/PrivGene
Differentially Private Model Fitting Using Genetic Algorithms
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Galactus
A neutral hydrogen galaxy modeling and fitting tool
Galactus is a new astronomical modeling package. The aim is to model and fit datacubes from radio synthesis telescopes. Galactus is the only HI tool which can predict the HI (self-)absorption. -
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NanocalcFX
Open Source Data Evaluation Software
NanocalcFX is a free and open source evaluation software for a simple yet comfortable solution to deal with thousands of transport kinetics measured with a fluorescence microscope or similar kinetics. Data can be imported from CSV or Excel files or using the dedicated image stack analyser (NISA). You can get sample data at the nanocalcFX homepage. Note that nanocalcFX is currently in a beta state. -
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ABM-Calibration-SensitivityAnalysis
Codes and Data for Calibration and Sensitivity Analysis of ABM
Find here the model, code, and example results of parameter fitting/calibration and sensitivity analysis for an agent-based model using NetLogo and R. The corresponding manuscript is published in Journal of Artificial Societies and Social Simulation as: Thiele JC, Kurth W, Grimm V (2014): Facilitating parameter estimation and sensitivity analysis of agent-based models: a cookbook using NetLogo and R. <http://jasss.soc.surrey.ac.uk/xx/x/x.html> Methods/Techniques used are: a. Parameter... -
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Osmotic Pressurization Dynamics
Calculates dynamics of osmosis-based pressure generation using PEG.
This MATLAB script calculates pressure as a function of time inside a submerged membrane-bound compartment containing an aqueous PEG solution as an osmotic driver. It can also be used to calculate a membrane's hydraulic permeability by fitting experimental data. The model used accounts for the dilution effects caused by the compartment's expansion. All of this project's resources can be found in the "Files" section. -
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AlgART Java Libraries
Open source library for processing arrays and matrices
AlgART Java libraries for processing arrays and matrices are open-source product, distributed under MIT license. So, anyone can use them for free without any restrictions. Main features: 63-bit addressing of array elements (64-bit long int indexes), memory model concept (allowing storing data in different schemes from RAM to mapped disk files), wide usage of lazy evaluations, built-in multithreading optimization for multi-core processors, wide set of image processing algorithms over...