Search Results for "sh" - Page 3
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Showing 156 open source projects for "sh"
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1
meerkat.sh
script of SV calling in Exome-seq
meerkat.sh is a shell script to run Meerkat for SV detection in Exome-seq. The script accepts single BAM or paired tumor-normal BAMs. -
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Chronos
Fault tolerant job scheduler for Mesos to handle dependencies
...It is a distributed and fault-tolerant scheduler that runs on top of Apache Mesos that can be used for job orchestration. It supports custom Mesos executors as well as the default command executor. Thus by default, Chronos executes sh (on most systems bash) scripts. Chronos can be used to interact with systems such as Hadoop (incl. EMR), even if the Mesos slaves on which execution happens do not have Hadoop installed. Chronos is also natively able to schedule jobs that run inside Docker containers. Chronos has a number of advantages over regular cron. It allows you to schedule your jobs using ISO8601 repeating interval notation, which enables more flexibility in job scheduling. ... -
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clean-html-sh
clean-html.sh
clean-html.sh - bash script to clean HTML. 1) Convert the stored pages in UTF-8. 2) defecating saved pages of extra spaces, tabs, blank lines, scripts, images, meta-information. PS: when an <pre> produces limited filtering! ! Not all characters can be transcoding UTF-8. Be careful. -
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Fail2Ban Webinterface
Webinterface to (un)ban IPs in Fail2Ban
...Contact me: steffen[at]simails.de Update for Debian 13 Trixie and others running systemd: To get the socket-permission fix working, do this: 1. systemctl edit fail2ban [Service] ExecStartPost=/bin/sh -c 'while [ ! -S /var/run/fail2ban/fail2ban.sock ]; do sleep 0.2; done; chmod 0766 /var/run/fail2ban/fail2ban.sock' -> strg+o, strg+x 2. systemctl daemon-reload 3. systemctl restart fail2ban 4. ls -l /var/run/fail2ban/fail2ban.sock -
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5
ssh-utils
Support Tools for OpenSSH with multiple agents
...Current contained tools: - ssh-agent-manage.sh The management of the parallel SSH access by multiple agents, sessions, and keys. - ssh-pk-type.sh Displays private key type. - ssh-pk-asn1.sh Displays the private key as ASN.1. -
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EasyShell
Eclipse plugin that opens system console, file browser for selection
= Project migrated to Git Hub: https://github.com/anb0s/EasyShell = EasyShell: opens shell window, runs selected file in the shell, opens explorer window (or nautilus / konqueror) and copies path. Update site: http://anb0s.github.io/EasyShell Eclipse Marketplace: http://marketplace.eclipse.org/content/easyshell -
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LiveChat - Lightweight Chat option
A Lightweight, Simple chating option for conversation
This is a lightweight, simple chatting option, that has no central server, made in Java, and console-based. It includes a server runnable, bat and sh files and client runnable (Attention: only 2 peoples at minimum and at maximum can connect to server, this issue will be removed later!). The idea behind this project, is to offer a direct communication channel, that turns messages faster and secure. -
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CopyRightNoticeGenerator
Shell script and template for the GPL copy right notice.
...Default templates As default, I wrote the templates of the copryright notice of: GNU General Public License version 3 Apache License, Version 2.0 for the files with: .java .xml .sh .txt extensions. $. Example for how to use the 'here document' In the UNIX shell scripting, the idiom by 'here document' can make the variable substitution easier. And this shell script depends on the 'here document' expression. So, you can think of it as the example of how to use the 'here document'. -
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10
dpkg_mini
dpkg mini allot of dpkg in 2 page script (any linux)
dpkg_mini is a very compact script that does some useful actions upon debian archive files. dpkg_mini [install remove skel implode explode control list depends check configure] file(s).deb [dir] works in any linux with ar(1) tar(1), dpkg is not required of course is not a substitute for dpkg(8). ie, install and skel work outside of and independantly from the dpkg system. however for checking out .deb or testing or avoiding force it's a neat little tool ! see man... -
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XDM-OPTIONS Display Manager Suite
XDM-OPTIONS Display Manager Suite
X Display Manager. Xhost Phonebook, X Login, X Desktop Chooser, and XDM X server (vnc server). Easy install, Clean uninstall (and X up when done). Highly compatible, no libs. Like gdm but different in goals and features. Great as primary dm or as a backup dm. pre-requirements: X Windows. xdm(1) binary (package) if it was removed (xdm is part of traditional X) -
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...You can find this on the official site of this project (german). You can find a link to this very simple site below. How to start: -------- Windows: double-click on CryptolinN.exe -------- Linux: sh CryptolinN.sh OR FIRST chmod +x CryptolinN.sh THAN ./CryptolinN.sh -------- Console: java -jar CryptolinN.exe --help N = version number
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13
MP3SongsExtractor
Cutting a large MP3 file into pieces
Let's assume you need to cut a large MP3 file into pieces (songs, speeches). This program generates a script (.bat, sh) with calls to the (free) ffmpeg program that will, in turn, cut the MP3 file. You only need to supply a text file with the information (artist, album, songs with durations or start/end times). The text file itself is simple. First line: artist. Second line: album. Following lines: the songs (titles and durations). Songs format is quite open and flexible; just throw the titles and the durations (or start times) and the program will try to figure out what to do. ... -
14
OSXBrowserHistory
OSX Browser History - a collection of scripts to dump browser history
OSX Browser History - a collection of scripts to dump browser history OSXBrowserHistory provides a set of scripts and associated files that can be used to dump browser history from Firefox, Google Chrome and Safari: OSXDumpChromeHistory.v2.sh OSXDumpChromeHistory.v2.scpt OSXDumpFirefoxHistory.v2.sh OSXDumpFirefoxHistory.v2.scpt OSXDumpSafariHistory.v3.Select.sh OSXDumpSafariHistory.v3.Sort.sh OSXDumpSafariHistory.v3.py OSXDumpSafariHistory.v3.rb OSXDumpSafariHistory.v3.scpt OSX Find Bookmarks OSXFindBookmarks provides a simple method and scripts to search bookmarks from all three web browsers. ... -
15
sinlin
sinlin - SVG preprocessor, that can add data from .ods files to SVG
...Other functions (that not need .ods data): "$x, y, z" - Array with values x, y, z; "$x; y; z; n" - Arithmetic Progression "$[x]^2+3" - Expression Example: Range x in .ods file: [1, 2, 3, 4, 5] Source <svg> <g attr="$x" attr1="$[1;1;5]" attr2="$1, 2, 3, 4" > </svg> Out: <svg> <g attr="1" attr1="1" attr2="1"></g> <g attr="2" attr1="2" attr2="2"></g> <g attr="3" attr1="3" attr2="3"></g> <g attr="4" attr1="4" attr2="4"></g> </svg> Source: https://github.com/step-artur87/sinlin Tutorial: https://sourceforge.net/projects/sinlin/files/sinlin_tutorial.pdf/download Examples: https://www.dropbox.com/sh/6ottxnawy5nfils/AABQro2tTlVJhy3LIBmtt4gXa?dl=0 In early April I will suspend development of the program and go offline (probably to September) -
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OpenSBE is a universal software building framework based on Autoconf, GNU Make, Perl and sh. The framework provides a build environment that is platform, language, and compiler independent.
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MA Shell Initialisation
BASH shell initialisation framework
A BASH, SH and KSH (and maybe others) initialisation framework that enables your shell environment to handle logging on to different sites & operating systems and configure your environment and the different software installed at different sites etc. -
18
optimg-sh
OptImgSH - a set of scripts to optimize images.
OptImgSH - a set of scripts to optimize images. optimg.sh - optimizing images (jpg | gif | png) without losing quality. jpegmin.sh - optimizing images (jpg) with a loss of quality. -
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Tom's Virtual Twm
small Viirtual Window Manager w/multihost panning deskops
...(X11 also supports each host runnign apps on the others' screen) (* also from: uwm, twm, swm, X11, contributors, possibly mostly so) notes: complicated m4 system feature is not currently working (linux) but automake configure makes the compile / install of this "classic Sun Site tarball" a breeze $ sh ./configure --with-xpm --with-shape $ make $ make install -
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Power Decoder
The Power Decoder simulator for the evaluation of pooled shRNA screen
RNA interference (RNAi) screening using pooled, short hairpin (sh)RNA is a powerful, high-throughput tool for determining the biological relevance of genes for a phenotype. Assessing an shRNA pooled screen’s performance is difficult in practice; one can estimate the performance only by using reproducibility as a proxy for power or by employing a large number of validated positive and negative controls. -
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DLT - Debian Linux Tools [Emergency]
A bootable customized Emergency Debian Linux Live Tools-CD / Boot-USB
This bootable customized Emergency Debian Linux Live Tools-CD is a special Boot-CD Version for IT-Enthusiasts. It contains a Minimal Debian Version (AMD64). It is in Alpha-Version (Test-Version). It contains NO SPYWARE or other Sh*t. It´s build directly from the Debian Wheezy 7.8 Sources with Patch-Build, marked on the ISO-Filename. The Linux DLT-ISO is still in Development... Thanks for the following Alpha/Beta-Tester: Walch, Ludwig from Germany Please look at the Ticket-System for Updates on this Project. The Linux DLT ISO contains some Bugs. Please look here at the Ticket-System above for Information. ... -
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JStockCharts
User Friendly Technical Analysis tool for CSE Equity trading.
...New: Latest price data db file is available in the following repository. just download the db file and copy it in to the application folder. https://www.dropbox.com/sh/ahc3x5cfh3xmnsj/sirAJZ-paV The program features all the popular technical indicators and buy/sell signal generator ( Options -> Technical Indicators). The program also includes advanced counter comparison tool. Featured Technical Indicators *. RSI *. Accumulation/Distribution *. On Balance Volume *. CCI *. MACD *. EMA -
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spl@sh
PHP Server Side Controls
spl@sh is a standard extension for ALPHA CMS. spl@sh is a PHP based server side object oriented set of classes with which you can create and administer the most important HTML elements dynamically! spl@sh is to PHP as server side controls to ASP.net! -
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Blender Auto Update Bash Script
Update your Blender on Linux to the latest version - automatically
...See inside the file for more info on that. Then run: Most distros you can dbl click and select open in terminal. Or manually in a terminal: SUDO access is not required... sh <path to file> -
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chbGUI
Free Linux backup tool *
...Create different backups based on templates that can be tailored to distinct needs. (*) Tested on Linux and Mac OS X but may run properly without modifications on other Unix platforms that have the Bourne shell (/bin/sh) and a Java (1.6) or higher runtime environment. See documentation provided in the package for more details. Current versions: chbGUI v. 1.0.8 chb v. 191 Note: If you find errors or have questions, check the Wiki first. If you don't find the solution there, let me know by opening a ticket and assigning it to chbgui (see Support above).
