Search Results for "data structure" - Page 29

Showing 991 open source projects for "data structure"

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  • 1

    Hierarchical cluster engine HCE

    Hierarchical Cluster Engine project

    The main idea of this project – to implement the solution that can be used to: construct custom network mesh or distributed network cluster structure with several relations types between nodes, formalize the data flow processing goes from upper node level central source point to down nodes and backward, formalize the management requests handling from multiple source points, support native reducing of multiple nodes results (aggregation, duplicates elimination, sorting and so on), internally support powerful full-text search engine and data storage, provide transactions-less and transactional requests processing, support flexible run-time changes of cluster infrastructure, have many languages bindings for client-side integration APIs in one product build on C++ language... ...
    Downloads: 0 This Week
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  • 2

    SPE Toolbox

    MatLab functions for reading WinView/WinSpec .spe files

    This toolbox is a collection of MatLab functions for reading WinView/WinSpec files (.spe extension) directly to MatLab. It provides functions for reading full header from file into a structure, reading frames into matrices, and reading pixel values across all frames. You can use these functions to analyse and process experiment data stored in .spe files in MatLab, and to write functions to export .spe files to animated GIFs for use in presentations. Also includes simple MatLab application for converting files to GIF, AVI and .spe files, and provides functionality for quick addition of support for WinView-like formats by users, without the need to call developers.
    Downloads: 0 This Week
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  • 3

    drvq

    dimensionality-recursive vector quantization

    drvq is a C++ library implementation of dimensionality-recursive vector quantization, a fast vector quantization method in high-dimensional Euclidean spaces under arbitrary data distributions. It is an approximation of k-means that is practically constant in data size and applies to arbitrarily high dimensions but can only scale to a few thousands of centroids. As a by-product of training, a tree structure performs either exact or approximate quantization on trained centroids, the latter being not very precise but extremely fast. ...
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  • 4
    This library implements a thread-safe skip list data structure - a kind of list with good insertion, deletion and searching performances. It uses Fred Fish's dbug library as internal tracing/debugging system. See the web site for more details.
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  • 5
    SecStAnT

    SecStAnT

    Secondary Structure Analysis Tool for data selection and statistics

    SecStAnT is a tool for the automatic creation of data-sets of structures from Protein Data Bank (PDB) with user-defined structural composition, and for the calculation of their internal variables distributions. SecStAnT is able to 1. Select from PDB data sets of structures based on user specified secondary structures (defined based on internal PDB classification or on DSSP) and/or sequence motives. 2. Build Data-sets at different levels of resolution (all atoms, only backbone, only...
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  • 6
    nacho

    nacho

    Python micro web-framework and asynchronous networking library

    ...Because it encourages consistency among services, teams can spin up new microservices with a shared structure and skip repetitive setup. Though the repository may be less active than some major frameworks, it serves as a valuable jump-start for projects where speed and uniformity matter.
    Downloads: 0 This Week
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  • 7
    Nuclei

    Nuclei

    Feature rich GUI for nuclear decay schemes

    Nuclei is a software tool for the displaying of nuclear decay schemes and estimated energy spectra, the calculation of angular γ emission anisotropies, and the automated search for appropriate decay cascade properties. It uses the Evaluated Nuclear Structure Data Files (ENSDF). A description of Nuclei's functionality and results obtained using its search method was published in Nuclear Instruments and Methods in Physics Research, Section A: M. Nagl, et al., NIM A 726 (2013), 17-30 [doi:10.1016/j.nima.2013.05.045] ------------------------- © 2012-2013, Matthias Nagl, II. ...
    Downloads: 1 This Week
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  • 8
    Unsupervised TXT classifier

    Unsupervised TXT classifier

    Classify any two TXT documents, no training required - JAVA

    ...This extracts a relevant structure for both documents (and thus avoids the over-training) which are then compared using the Vector-Space analysis to give a range of belonging of one document to another (and thus avoids the shortage of information). This method can be used to create the user-defined classes by merging texts of certain categories and then to calculate the relevant distances between the documents, but this is not necessary.
    Downloads: 1 This Week
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  • 9

    virHap

    A Software package for Inferring the haplotype structure of a mixed vi

    PhyVar is an open-source software package for viral quasi-species reconstruction, which makes use of a novel phyloprobabilistic approach to infer the sub clonal composition and evolutionary history of a viral population from NGS data. The program aims to characterize and quantify the composition, the abundance and the evolutionary path of the underlying viral population within a given host by analyzing Next Generation Sequencing data. The program takes as input the collection of reads...
    Downloads: 0 This Week
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  • 10

    data2bin

    Create structured binary files from XML data.

    ...Your data in a XML file written down according to defined structure. ... and produces final binary file. It is able to pad Your strings with defined padding, check Your integers' sizes, it can fill default values where You didn't supply data, it can also, for example, put a "blank" array member at the end of an array etc. Whenever You change your structure in Your code, just update the data-description file and "rebuild" Your binary files without touching XML data files!
    Downloads: 26 This Week
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  • 11
    Provide a simple way of creating models for molecular dynamics simulation. Especially for LAMMPS.
    Downloads: 0 This Week
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  • 12

    Database to CSV

    "Database to CSV" project stores/loads data between database and CSVs

    "Database to CSV" allows to back-up data from database(Oracle, MySQL, SQL Server) in the form of CSV files. Each table data is stored in a separate CSV file. It also allows to load data from CSV files into the database. Program can be run from UI or from command line. There's one more advanced feature which allows merging of data from CSV file to Database. It is only available from command line. (It will take foreign keys and unique keys into consideration and then try to insert...
    Downloads: 0 This Week
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  • 13

    Simplicial

    A C++ framework for simplicial meshes of arbitrary dimension

    Simplicial provides a framework to work with simplicial meshes of arbitrary dimension. The data structure is "layered" so that any sort of homogeneous mesh can be represented. A specialized structure allows the representation of meshes with explicit adjacency information between top simplexes. Also, a further specialized structure allows the representation of so-called "liquidus" hypersurfaces that describe the behaviour of multi-component materials. ...
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  • 14

    All About Data Structures

    Sorting Searching List Template All

    This will help a new data structure learner to learn data structures quickly.
    Downloads: 0 This Week
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  • 15
    KochCurve

    KochCurve

    This small library implements a data structure for Koch curves.

    This small library implements the Koch curve, snowflake and anti-snowflake like a Shape to be used like any other Java shape. You can test the library by compiling the test applet in Files.
    Downloads: 0 This Week
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  • 16

    Systems Glycobiology

    Glycosylation Network Analysis Toolbox (GNAT)

    ...The original GNAT package (file GNAT.zip) provides functions for reading, writing, manipulation, visualization and simulation of glycan structures and glycosylation reaction networks (citation [1]). The second version of this software (GNATv2beta.zip) upgrades the original GNAT program with additional features that are geared towards incorporating glycan-structure experimental data into the simulation environment. For information about GNAT installation and usage, please see the GettingStarted.pdf file enclosed in the package. To cite GNAT: [1] Gang Liu, Apurv Puri and Sriram Neelamegham, Glycosylation Network Analysis Toolbox (GNAT): a MATLAB based environment for systems glycobiology, Bioinformatics 2013 29: 404-406
    Downloads: 0 This Week
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  • 17
    school Managment portal

    school Managment portal

    A comprehensive School Managment Application

    It’s a user friendly software with navigational tools which makes it appealing, attractive and easy to use. Each user has specialized user interface with access only to operations that are permissible to the specific user as allotted by the administrator. Developed with modern technology with the highest level of ethical standards and robust enough to accommodate the Nigerian, British and American curriculum. Updates and upgrades will be developed in cognizance with the structure of...
    Downloads: 2 This Week
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  • 18

    cvsba

    OpenCV wrapper for sba library

    ...The main features are: - Based on sba-1.6, one of the most popular and robust bundle adjustment implementation, which is extensively used and tested by the community - sba installation is not needed since it is included in cvsba - New CMake structure which makes the library compilation, installation and linkage easier - Similar interface than Bundle Adjustment implementation on cv::LevMarqSparse::bundleAdjust() - Include examples to test the library on synthetically generated data - GPL licence
    Downloads: 0 This Week
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  • 19

    Qudaich

    Performs local sequence alignment for NGS data

    Qudaich (queries and unique database alignment inferred by clustering homologs) is a software package for aligning sequences. Qudaich generates the pairwise local alignments between a query dataset against a database. The main design purpose of qudaich is to focus on datasets from next generation sequencing. These the datasets generally have hundreds of thousand sequences or more, and so, the input database should contain large number of sequences. Qudaich is flexible and its algorithmic...
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  • 20
    cd-hit

    cd-hit

    Ultrafast program for clustering large set of biological sequences

    ...CD-HIT is very fast and can handle extremely large databases. CD-HIT helps to significantly reduce the computational and manual efforts in many sequence analysis tasks and aids in understanding the data structure and correct the bias within a dataset. The CD-HIT package has cd-hit, cd-hit-2d, cd-hit-est, cd-hit-est-2d, cd-hit-454, psi-cd-hit, cd-hit-otu, cd-hit-lap, cd-hit-dup and over a dozen scripts for various clustering needs.
    Downloads: 5 This Week
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  • 21

    reco4j-neo4j

    Reco4j is a graph-based recommendation engine, this is the neo4j impl

    Reco4j is an open source project aims at developing a recommendation framework based on graph data sources. We choose graph databases for several reasons. They are NoSQL databases, so "schemaless". This means that it is possible to extend the basic data structure with intermediate information, i.e. similarity value between item and so on. Moreover, since every information is expressed with properties, nodes and relations, the recommendation process can be customized to work on every graph. ...
    Downloads: 0 This Week
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  • 22

    reco4j-core

    Reco4j is a graph-based recommendation engine

    Reco4j is an open source project aims at developing a recommendation framework based on graph data sources. We choose graph databases for several reasons. They are NoSQL databases, so "schemaless". This means that it is possible to extend the basic data structure with intermediate information, i.e. similarity value between item and so on. Moreover, since every information is expressed with properties, nodes and relations, the recommendation process can be customized to work on every graph. ...
    Downloads: 0 This Week
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  • 23
    Construct is a python module for bit-level, symmetrical parsing and building of data structures. Complex constructs are formed by a hierarchy of less-complex constructs, as well as user-defined constructs.
    Downloads: 0 This Week
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  • 24

    Hierachical_DNAcoder

    An Hierachical Approach to Multi-Reference Genome compression

    The storage and data transferring of large genome data are becoming important concerns for biomedical researchers. We present a novel multi-reference based genome compression method with a hierachical structure. Our approach works for the de facto standard alignment format (i.e., BAM) compression that is the pressing need at present. We align new sequences to a reference sequence using SOAP3, a GPU-based aligning software, and summarize mapping properties and information for exact mapped reads. ...
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  • 25

    GestureDetect

    Gesture detection with Kinect+OpenNI+Unity3D

    ...Since people do the the same gesture in different ways, before you try a gesture template trained by others, you may need to "play" the skeleton file first to see how the gesture was recorded. Or you may train your own gesture templates directly. See the usage for details. The function is provided in a package for Unity3D. It reads skeleton data from MS Kinect or similar motion capture devices. To acquire skeleton data, we uses OpenNI 1.5.4 because it is an open source library. The scripts in the project are written in c#. The algorithm we use is template matching. The structure of the code is clear and not very complicated. If you want to use it on other platforms, you may pick part of the scripts in the "GestureScripts" folder and try to edit them to fit other SDKs or platforms. ...
    Downloads: 0 This Week
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