Search Results for "hpc" - Page 2
Sort By:
Showing 109 open source projects for "hpc"
View related business solutions-
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
-
Demo Series - Small Business Backup By VeeamWatch this on-demand demo series and learn how to protect your Microsoft 365 data with clear, simple, actionable steps that are easy to implement for businesses of all sizes.
-
1
direct-data-flow-lib
The library for HPC data exchange
The library for HPC data exchange in form of input and output channels transparent for users -
2
rt-agents
Agent system for HPC real time applications
Agent system for HPC real time applications -
3
VMS Draw
user-friendly access to the latest computational spectroscopy tools
VMS Draw provides general utilities (e.g. normalization, conversion, and other manipulations of several spectra at the same time) and a flexible graphical user interface (GUI) for an easy use by non-specialists which allows a seamless flow of information between experimentally and theoretically oriented researchers. Finally, it permits effective interactions with other electronic structure codes [e.g., nuclear magnetic resonance (NMR), microwave] even if Gaussian 16 offers the widest set... -
4
Distributed MultiThreaded Checkpointing
Checkpoint/Restart functionality for Linux processes
...With the use of TightVNC, it can also checkpoint and restart X-Window applications. The OpenGL library for 3D-graphics is supported through a special plugin. It also has strong support for HPC (High Performance Computing) environments, including MPI and SLURM, through the github MANA project: https://github.com/mpickpt/mana -
Build Agents and Models on One PlatformGemini Enterprise Agent Platform is Google Cloud's comprehensive platform for developers to build, scale, govern, and optimize agents and models. Choose from Google's most advanced models and third-party models like Anthropic's Claude Model Family.
-
5
Haxentric
An Adobe/Apache Flex-like Haxe/HTML/JavaScript Framework
Haxentric is a client side Haxe/HTML/JavaScript framework. It is similar to Adobe/Apache Flex (but not the same). It has a precompiler (named HPC) which converts HXML codes to Haxe classes. Haxe classes are converted to JavaScript codes by the Haxe compiler. It has a packager (named HPKG) which creates single HTML applications. And with the embedder (named HE) you can embed text files into a class. Available under LGPL 3.0. -
6
img
Standalone, daemon-less, unprivileged Dockerfile and OCI
...The goal of this project is to be able to build container images for unprivileged users. Running unprivileged allows companies who use LDAP and other login mechanisms to use img without needing root. This is very important in HPC environments and academia as well. Currently, this works out of the box on a Linux machine if you install via the directions covered in installing from binaries. This installation will ensure you have the correct version of img and also runc. -
7
progrep
Utility to show live progress, status & stats for running simulations
...It shows % completed, time remaining, time elapsed, number of threads, MPI_Rank(if any), CPU usage & speed (FPS). The FPS measures may be used in benchmarking, e.g. while optimizing HPC algorithms for performance. progrep supports both single-threaded and parallel (multicore/multinode - e.g. OpenMP/MPI) jobs. progrep can also report for jobs running on remote hosts, e.g. jobs running on Linux Clusters. progrep works in client-server model. The server can be installed in your simulation source code with only 4 extra lines (API). ... -
8
OpenMultiphysics
Application Integration for HPC Multiphysics
The OpenMultiphysics project is the home for community-driven development of application integration technologies designed to aid in the design and implementation of multiphysics simulation capabilities. Design and development in this project is driven by the Consortium for Open Multiphysics. Feel free to visit us at our GitHub site as well: https://github.com/IllinoisRocstar/IMPACT -
9
CASUP
Cellular Automata library for SUPercomputers (CASUP)
CASUP is a Cellular Automata (CA) library for HPC and supercomputers. It can be used in materials science (microstructure evolution, grain coarsening, fracture etc.), physics (Ising magnetisation) and for many other CA. If you use the library, please reference it as: A. Shterenlikht, L. Margetts, Three-dimensional cellular automata modelling of cleavage propagation across crystal boundaries in polycrystalline microstructures, Proc. -
Paessler - Monitor Your Whole Network in MinutesWaiting weeks for a monitoring rollout isn't an option when infrastructure doesn't stop running. PRTG's auto-discovery scans your network and suggests from over 200 pre-configured sensor types, so you're watching servers, applications and devices within minutes, not after a multi-week deployment. Enterprise-strength monitoring, without the enterprise complexity. Start your free trial today.
-
10
coarrays
A free Fortran 2008, 2018 coarrays course with notes and exercises
...The F2008 standard provides coarray syntax, remote calls, coarray data objects, allocatable coarrays, syncronisation, atomics, etc. F2018 adds new functionality, e.g. collectives, teams, events, more atomics. Coarrays are used extensively in CASUP library for HPC (https://cgpack.sourceforge.io). The course is aimed at experienced Fortran users. Working knowledge of Fortran is assumed. The course is designed for a 1 day study with an instructor. Multiple exercises with full solutions are accompanied by notes. This course is taught to the University of Bristol HPC users. Exercises have been verified with Intel and GCC/OpenCoarrays. ... -
11
DISSCO-2.0.2
Computer music on HPC
-
12
EECluster
Tool for energy-efficient resource management in HPC clusters
EECluster is software tool for managing the energy-efficient allocation of the cluster resources. EECluster uses a Hybrid Genetic Fuzzy System as the decision-making mechanism that elicits part of its rule base dependent on the cluster workload scenario, delivering good compliance with the administrator preferences. In the latest version, we leverage a more sophisticated and exhaustive model that covers a wider range of environmental aspects and balances service quality and power... -
13
X10
Performance and Productivity at Scale
...Both its modern, type-safe sequential core and simple programming model for concurrency and distribution contribute to making X10 a high-productivity language in the HPC and Big Data spaces. User productivity is further enhanced by providing tools such as an Eclipse-based IDE (X10DT). Implementations of X10 are available for a wide variety of hardware and software platforms ranging from laptops, to commodity clusters, to supercomputers. -
14
MarDRe
MapReduce-based tool to remove duplicate DNA reads
...This tool allows bioinformatics to avoid the analysis of not necessary reads, reducing the time of subsequent procedures with the dataset. MarDRe is the Big Data counterpart of ParDRe (link above), which employs HPC technologies (i.e., hybrid MPI/multithreading) to reduce runtime on multicore systems. Instead, MarDRe takes advantage of the MapReduce programming model to significantly improve ParDRe performance on distributed systems, especially on cloud-based infrastructures. Written in pure Java to maximize cross-platform compatibility, MarDRe is built upon the open-source Apache Hadoop project, the most popular distributed computing framework for Big Data processing. -
15
VaspStudio
An useful tool to submit your VASP job on HPC, manage your jobs and extract eneries...
-
16
IPS Framework
A simple Python framework for loosely-coupled multiphysics simulations
The IPS Framework has migrated to https://github.com/HPC-SimTools/IPS-framework The IPS framework was developed to support loosely-coupled integrated modeling of fusion plasmas (and was originally the Integrated Plasma Simulator). However, the design is quite general, and is suitable for many scientific and engineering domains. In addition to plasma physics, it is also being used in the engineering of batteries. -
17
TOFFEE-DataCenter
Linux Server and Data-Center WAN Optimization
TOFFEE-DataCenter is the new TOFFEE variant meant for Data-Center, Server, HPC, Load Balancing, Cluster/Cloud Computing and SDN deployments. With TOFFEE-DataCenter (and or TOFFEE), OEMs and other equipment vendors can make use of this platform/stack, integrate, port and build WAN Optimization devices/appliances on to their existing product range. Or build a dedicated WAN Optimization hardware product series via the same. -
18
JavaCá&Lá
A java middleware for HPC and IoT
The Java Cá&Lá (or just JCL - www.javacaela.org) is a middleware that integrates high performance computing (HPC) and Internet of things (IoT) in a unique API. It enables asynchronous remote method invocation and distributed shared memory services over multicore computer architectures or over multicomputer clusters. Sensing services are also feasible in JCL IoT version. An API for internal control enables collecting several times and memory usage of tasks submitted to the JCL cluster. ... -
19
BOWS
Bioinformatics Open Web Services
BOWS is a generic system based on Web Services which allows programmatic access to applications running on HPC clusters. BOWS allows incorporation of several independent applications since programmers can install them in HPC clusters in any programming language. The lonely requirement is to write a script named “arrow” which calls BOWS back-end services periodically in order to check for new processes and their required parameters. If a new process is found, the “arrow” script should change the requisition status from waiting to running, run the process in the HPC cluster and, when the job is complete, call a BOWS back-end service to send the results. ... -
20
UIBK software deployment framework
Providing scientific computing software to HPC users.
This software deployment framework has been used for years at the University of Innsbruck (UIBK) to supply scientific computing software to our users. It has been successfully applied on all of our local HPC (High Performance Computing) infrastructure (LEO1-LEO3), as well as on collaborative systems, jointly operated with other Universities (supercomputer MACH at the Johannes Kepler University, Linz). The framework is also in use at the Vienna Scientific Cluster 3, the largest HPC system in Austria. -
21
ViralFusionSeq [VFS]
Accurately discover viral integration events and fusion transcripts
.... ** Announcement 1**: VFS is superior to Virus-Clip. https://sourceforge.net/projects/viralfusionseq/files/VFS.vs.Virus-Clip.pdf/download As of 2016, VFS is the only viral integration tool available at NIH HPC system. https://hpc.nih.gov/apps/ViralFusionSeq/ ViralFusionSeq (VFS) is a versatile high-throughput sequencing (HTS) tool for discovering viral integration events and reconstruct fusion transcripts at single-base resolution. VFS combines soft-clipping information, read-pair analysis, and targeted de novo assembly to discover and annotate viral-human fusion events. ... -
22
5.Kernelized qtl-haplotype mapping (HPC)
Fortran/R program for kernelized qtl-haplotype mapping by mixed model
Kernelized qtl-haplotype mapping (named KHAMMIX) is a Fortran/R program which performs parallel haplotype based scans of chromosomes, by mixed model analyses, for diploid organisms. Two kernels; the Gaussian and Van Raden kernels, are allowed for the mixed model analyses. The haplotypes are defined by a sliding window of L SNP markers (L is an integer greater or equal to 1). Hence, 2^L haplotypes can be (not necessarily) observed for a sliding window (e.g. 2^6=64 for L=6). Reference:... -
23
iCubing
Several OLAP algorithms, data structures and HPC OLAP versions
OLAP technology is very useful for decision makers and data mining tools with BIG data. In this direction, we implement iCubing project with several multidimensional data cube approaches for cube indexing, querying, updating and mining. There are also several cube types, i.e. alphanumeric cubes, text cubes with unstructured data and geo cube with geo types, dimensions, measures and hierarchies, so the OLAP area continues a hard challenge after more than 20 years of the seminal paper of Jim... -
24
4. Bagging Nadaraya Watson Estim. (HPC)
Shell/R program to perform Bagging of the Nadaraya Watson Estimator
Shell/R program which performs bagging of the Nadaraya Watson Kernel estimator by parallel computing -
25
2. Tune kernel Ridge MM (HPC parallel)
Shell/R program which tunes kernel Ridge by parallel computing
A shell/R program for HPC Linux clusters which allows users to estimate the optimal rate of decay parameter for kernel Ridge regression, within the mixed model framework, for prediction. The optimal rate of decay is estimated using K-folds cross validation parallelized using cluster nodes.
