Search Results for "genetics" - Page 2

POPBAM is a tool to perform evolutionary or population-based analyses of next-generation sequencing data. POPBAM takes a BAM file as its input and can compute many widely used evolutionary genetics measures in sliding windows across a genome.

parastructure is a perl script collection to run the population genetics software STRUCTURE from Pritchard et al. 2000 (http://pritch.bsd.uchicago.edu/structure.html) in parallel on a cluster (beowulf type). Each run of K (the number of populations) is executed separately on each CPU of the cluster trough queue system based on PBS. A summary statistics table and distruct figures (Noah Rosenberg: http://www.stanford.edu/group/rosenberglab/distruct.html) are built at the end of the run. A patch...

Interactive tutorials for undergrad genetics students illustrating DNA replication, transcription, and translation. Original color graphics and animations. * Source requires Qt libraries (http://qt-project.org/downloads) * Windows version @: http://www.cs.transy.edu/nsmith/BLT_Windows.zip

GenLab abbreviation of Genetics Laboratory .It is a user-friendly bioinformatics tool to support your bioinformatics lab work. GenLab creates a software user-friendly environment, which makes users to make a large number of protein, DNA, and RNA sequence analysis and excellent graphical viewing. It also provides powerful environment for simulations of Protein 3D molecular models. GenLab typically provides: •User-friendly graphical tools used for finding and working with relevant regions...

Estimate distribution of fitness effects of new mutations.

The aim of project is to create simplified society simulator including virtual peaople relationships, genetics, needs, behavior etc.

GeneNetwork is an open source bioinformatics software resource for systems genetics used to study gene networks that link sequence variants to differences in gene and protein expression and to differences in traits such as health and disease risk.

Expediting cancer genetic and neurogenetic discovery through Bayesian Network Analysis of microarray data. Designed for genetics researchers, this takes in raw data (and a very small about of user input) and outputs reports usable by biologists.

Java forward population genetics simulation tool similar to 'ms'

Assimilator is a molecular genetics tool to inform selection of associated genetic variants for functional studies

IMPORTANT UPDATE! This project has migrated to https://github.com/polyworld/polyworld . This SourceForge repository is now obsolete. Polyworld is one of the earliest and most sophisticated artificial worlds developed to study Artificial Life and Artificial Intelligence, using computational genetics, physiology, metabolism, neural networks, learning, vision, and behavior.

Ouroborus is an artificial life framework for mobile agents on a background of cellular automata. It can be used to teach and research topics such as population genetics, ecology and evolution. The demo includes a curses view and live Csound audio.

This project is using genetics algorithms to complete scheduling tasks such as timetables for elementary / high schools etc. Currently NetBeans project with no GUI and simple HTML export.

AEvolution is an artificial life simulator, simulating (multi)cellular behavior using a genetics algorithm. Multiple planes can be connected via either local or ftp-based teleporters...

Opensource software projects for genetics and genomics from Sage Bionetworks.

The goal of the GeneText project is the development of a software package that will enable users to dynamically generate an information summary page from multiple sources given a search term. Fields of interest are biology, genetics and bioinformatics.

SimGen is Simulated Genetics. It simulates a simple DNA for moving within simple bacteria eating plankton. As good for Simulation it has Object-Oriented Design and is Coded in Java. It is a Applet and Dektop-Application and can be extended.

Biological sample supervisor. Plant material and more (cellular, genetics).

a cross-platform framework and environment for haplotype analysis with a special focus on human and medical genetics in python/wxpython

GeXpert is an expert system that can be used for genetics and metabolic pathway analysis. GeXpert can help Biotechnologists do their work faster, reducing the time required for performing, analyzing and storing the results of Bioinformatics research.

Molecular Genetics Explorer is a package of applications that provide virtual laboratories with which students can explore Mendelian genetics, the construction of proteins from genes, and the (simulated) biochemical activity of those proteins.

GENtle is a free multipurpose tool for genetics and biochemistry. It manages DNA and amino acid sequences, does PCR, restriction, ligation, sequence annotation etc.

A game/toy that simulates a world environment with organisms to survive: game of life with more complex rules. Every programmer can make his/her own organisms and compete with others. Hopefully in the future it will support genetics.

Weka-CG is a comprehensive data mining software package for human genetics. It is an extension of the open-source, JAVA-based, Weka data mining package.

Linux for Science. From Astronomy to Zoology (Genetics, Physic and Bioinformatic are included).