An intuitive molecular editor and visualization tool
Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science and related areas. It offers a flexible rendering framework and a powerful plugin architecture.
QPDF is a C++ library and set of programs that inspect and manipulate the structure of PDF files. It can encrypt and linearize files, expose the internals of a PDF file, and do many other operations useful to end users and PDF developers.
MUMmer is a modular system for the rapid whole genome alignment of finished or draft sequence. This package provides an efficient suffix tree library, seed-and-extend alignment, SNP detection, repeat detection, and visualization tools.
Vipul's Razor is a distributed, collaborative, spam detection and filtering network. The primary focus of the system is to identify and disable an email spam before its injection and processing is complete.
AMOS is a collection of tools for genome assembly
AMOS is a collection of tools and class interfaces for the assembly of DNA reads. The package includes a robust infrastructure, modular assembly pipelines, and tools for overlapping, consensus generation, contigging, and assembly manipulation.
This is a C library to check the validity of German and Austrian Bank Account Numbers. All currently defined test methods by Deutsche Bundesbank (Dec 2017: 00 to E4) are implemented. Modules for AWK, Perl, PHP, Python, Ruby, C#.net and VB.net are included too. The package includes also an IBAN converter to generate (german) IBANs and BICs from account data. All currently defined IBAN rules by Deutsche Bundesbank are implemented (Dec 2017: 57 rules) and tested against independent solutions.
Collectl is a light-weight performance monitoring tool capable of reporting interactively as well as logging to disk. It reports statistics on cpu, disk, infiniband, lustre, memory, network, nfs, process, quadrics, slabs and more in easy to read format.
Binary Perl Distribution
Binary perl distribution with pre-built modules for Wx, DBD::Pg and DBD::mysql.
Perl bindings to the Modern OpenGL API
The Perl OpenGL 2 module provides bindings to the modern OpenGL APIs for use from the perl language.
Social Networking PHP Script
Big social networks put plenty of websites out of business - anyone can create a group, say, on Facebook, and it's much easier than to build and support whole website. Now we want to get web-masters back into the game, arming them with the same functionality major social networks have. The Micro is the simplest GRA4-powered Social Network. It can run on any PHP hosting (including free ones), and does not even require a database server. Demo: http://micro.ucq.me/gra4/activity Free hosting with auto-installer: http://ucq.me After single 2-minute-long installation your website will have social features likes, friends, groups, blogs, messaging, activity stream, market, events and much more. Wiki: http://en.wiki.gra4.com/Category:Webmaster_guide Before you install the Micro, please make sure you are installing the newest version: http://gra4.com/file/group/97/all
Overview of pre-defined compiler macros for standards, compilers, operating systems, and hardware architectures.
Webtunnel is an HTTP tunnel with some unique features: it runs in the context of a web server; it uses simple requests/responses for proxy traversal; and it is multi-threaded to allow many parallel connections to many destinations simultaneously.
XSH is a powerfull command-line XML editing tool/programming language in the manner of Unix shell interpreters and line-oriented text editors like ed which can be used either interactively or for batch-mode XML processing.
Xuse manages requirements, use cases & other artefacts that drive software design. Xuse focuses on clear documentation & communication. It defines an XML data model for requirements & use cases with XSLT providing multiple derived views: HTML/SVG/PDF. Note there is no GUI for entering requirements, however another project (https://sourceforge.net/projects/xguse/) will provide a GUI.
A light and easy to use programmer's editor for windows
Having moved colmux to collect as of v4.8.3, the only utility here is colplot, which may ultimately simply become a tarball of the same name once the dust over this last reorganization settles.
Homepages for my projects: userinfo, pwmd, libpwmd, cboard, ncast, ezxradio and bubblegum. There are also code snippets, both VIM and EPIC scripts and more.
This is a collector site of tools and scripts for the digital forensics. http://scripts4cf.sf.net
A web-based software package for comparative genomics
Sybil is a web-based software package for comparative genomics
A tool for finding differences in binary files.
screenie - screen(1) session handler (wrapper)
Punchout! is a simple and straightforward time clock system that allows an administrator to set up multiple clients each with their own pay rate. The user can then punch the Punch In! or Punch Out! button to track their hours and pay.
MoveBase, consists of 2 sub-projects: 1) an Editor, used to catalogize your own collection of DVDs, SVCDs, VCDs and VHS-tapes and 2) a static Browser, allowing anyone else to browse through your collection without the need of the original database.
PumpedUp is a group of programs that are used to gather system performance data on a second by second basis and create real time or static graphical web pages. (Does Nagios alarms based on performance too!) Executables for Lin, Win, Solaris included.
The Introspector enables the programming tools that deal with source code such as the compiler to communicate in a standard and neutral manner reducing the accidental cost of programming. http://github.com/h4ck3rm1k3/