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Top Apps

  • Identify and respond to threats before damage is done Icon
    Identify and respond to threats before damage is done Icon

    A SIEM that makes it easy to use logs for security, compliance, and troubleshooting.

    SolarWinds® Log & Event Manager (LEM) delivers comprehensive Security Information and Event Management (SIEM) capabilities in a highly affordable, easy-to-use, and quick-to-deploy virtual appliance. LEM provides the visibility, security, and control that IT professionals need to alert on and respond to security threats, and assist in meeting the regulatory compliance guidelines of HIPAA, PCI DSS, SOX, and more. Try it FREE for 30 days!
  • ManageEngine Now Lets You Patch Computers From Cloud Icon
    ManageEngine Now Lets You Patch Computers From Cloud Icon

    ManageEngine Patch Manager Plus offers patching capabilities on cloud - Patch all OS updates and 550 third party apps on-demand and stay secure!

    Last year saw the hackers unleash their expertise in skills for a ransom - targeting those unpatched computers in data-critical institutions. Only if the computers were patched on time, billions of dollars could have been saved. ManageEngine’s Patch Manager Plus comes to your rescue, offering you an automated patching solution, now on cloud, for latest hotfixes of Windows updates and a wide range of third-party applications (over 550 of them).
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  • PyRx - Virtual Screening Tool Icon

    PyRx - Virtual Screening Tool

    Virtual Screening software for Computational Drug Discovery

    PyRx is a Virtual Screening software for Computational Drug Discovery that can be used to screen libraries of compounds against potential drug targets. PyRx enables Medicinal Chemists to run Virtual Screening from any platform and helps users in every step of this process - from data preparation to job submission and analysis of the results. While it is true that there is no magic button in the drug discovery process, PyRx includes docking wizard with easy-to-use user interface which makes it a valuable tool for Computer-Aided Drug Design. PyRx also includes chemical spreadsheet-like functionality and powerful visualization engine that are essential for Rational Drug Design. Please visits PyRx home page to learn more about PyRx and watch videos on how to use it.

    Downloads: 225 This Week Last Update: See Project
  • Jena

    Jena is Java toolkit for developing semantic web applications based on W3C recommendations for RDF and OWL. It provides an RDF API; ARP, an RDF parser; SPARQL, the W3C RDF query language; an OWL API; and rule-based inference for RDFS and OWL. Jena is now an Apache project: http://jena.apache.org/

  • Gimias Icon

    Gimias

    Graphical Interface for Medical Image Analysis and Simulation

    GIMIAS is a workflow-oriented environment for solving advanced biomedical image computing and individualized simulation problems, which is extensible through the development of problem-specific plug-ins. In addition, GIMIAS provides an open source framework for efficient development of research and clinical software prototypes integrating contributions from the Physiome community while allowing business-friendly technology transfer and commercial product development.

  • Avalon Cheminformatics Toolkit Icon

    Avalon Cheminformatics Toolkit

    Avalon Toolkit for SMILES-based cheminformatics services

    The Avalon Cheminformatics Toolkit contains tools to render and canonicalize SMILES and manipulate MOL file and related formats as well as structure fingerprinting.

  • Staden Package

    A fully developed set of DNA sequence assembly (Gap4 and Gap5), editing and analysis tools (Spin) for Unix, Linux, MacOSX and MS Windows.

    Downloads: 185 This Week Last Update: See Project
  • Pyramid - The Complete Self-Service Analytics Platform Icon
    Pyramid - The Complete Self-Service Analytics Platform Icon

    Easily combine data from multiple sources to build dashboards and reports with our scalable solution built for mid-size to enterprise companies.

    Pyramid combines analytic tools often found in separate applications. It features a graphically based ETL to model data and incorporate machine learning algorithms, intuitive data discovery tools that produce simple and advanced visualizations, a presentation builder for creating analytic applications and presentations, and an enterprise-grade report builder—all in a single, integrated platform that can be accessed from any browser or device.
  • PyTables - Hierarchical datasets Icon

    PyTables - Hierarchical datasets

    The goal of PyTables is to enable the end user to efficiently and easily manipulate large datasets (both homogenous, i.e. arrays, and heterogenous, i.e. tables) on a persistent, hierarchical way.

  • Ascape Icon

    Ascape

    A framework and runtime environment for exploring agent-based models designed to support the definition of models using an expressive, high-level and extensible Java API and to support the exploration of these models in both interactive and batch mod

  • mpiP

    mpiP is a lightweight profiling library for MPI applications.

  • SNFaceCrop, face detection and cropping

    SNFaceCrop, face detection and cropping software

    SNFaceCrop is a Windows-based application to detect and crop faces from an image file. The detected faces can be automatically saved into files or copied into the Windows clipboard. SNFaceCrop is open source and using OpenCV library for face detection.

  • Voce

    A speech synthesis and recognition library that is cross-platform, accessible from Java and C++, and has a very small API. Uses CMU Sphinx4 and FreeTTS internally.

  • Find out what (or who) is slowing down your network Icon
    Find out what (or who) is slowing down your network Icon

    Get comprehensive network bandwidth analysis and performance monitoring with SolarWinds® Bandwidth Analyzer Pack.

    Network slow, but you don't know the cause? Use Bandwidth Analyzer Pack (BAP) to monitor and analyze network bandwidth performance and traffic patterns. With BAP, you can identify which users, applications, and protocols are consuming the most bandwidth. You can also monitor Wireless LAN Controller traffic to see what applications and clients are using your wireless network. Try it free for 30 days!
  • Oscill8

    Oscill8 is a suite of tools for analyzing dynamical systems which concentrates on understanding how the dynamical behavior depends on the parameters using bifurcation theory and reaction network theory.

  • RDKit Icon

    RDKit

    Open-Source Cheminformatics and Machine Learning

    A collection of cheminformatics and machine-learning software written in C++ and Python. NOTE: the RDKit source code and downloads are now in github: https://github.com/rdkit/rdkit The core algorithms and data structures are written in C++. Wrappers are provided to use the toolkit from either Python or Java. Additionally, the RDKit distribution includes a PostgreSQL-based cartridge that allows molecules to be stored in relational database and retrieved via substructure and similarity searches.

  • LiveGraph

    A real-time graph plotter. While your application is computing and logging results to a CSV file using the LiveGraph Writer API, the plotter lets you visualise and monitor the results live - by instantly plotting charts and graphs of the data.

  • CRF++

    CRF++ is a simple, customizable, and open source implementation of Conditional Random Fields (CRFs) for segmenting/labeling sequential data. CRF++ is designed for generic purpose and will be applied to a variety of NLP tasks.

  • UNFS3

    UNFS3 is a user-space NFSv3 server

    UNFS3 is a user-space implementation of the NFSv3 server specification. It provides a unified mountd and nfsd program and so far runs under Linux, NetBSD, and Solaris.

  • RPNcalculator Icon

    RPNcalculator

    Nice looking calculator using Reverse Polish Notation (RPN) written for Windows. It supports DEC, HEX, BIN, OCT numbers, GRAD, RAD and DEG.

  • Java Modbus Library

    jamod is an object oriented implementation of the Modbus protocol, realized 100% in Java. It allows to quickly realize master and slave applications in various transport flavors (IP and serial).

  • Modular toolkit for Data Processing MDP Icon

    Modular toolkit for Data Processing MDP

    The Modular toolkit for Data Processing (MDP) is a Python data processing framework. From the user's perspective, MDP is a collection of supervised and unsupervised learning algorithms and other data processing units that can be combined into data processing sequences and more complex feed-forward network architectures. From the scientific developer's perspective, MDP is a modular framework, which can easily be expanded. The implementation of new algorithms is easy and intuitive. The new implemented units are then automatically integrated with the rest of the library. The base of available algorithms is steadily increasing and includes signal processing methods (Principal Component Analysis, Independent Component Analysis, Slow Feature Analysis), manifold learning methods ([Hessian] Locally Linear Embedding), several classifiers, probabilistic methods (Factor Analysis, RBM), data pre-processing methods, and many others.

  • MAGeCK

    Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout

    Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent genome-scale CRISPR-Cas9 knockout screens technology. For instructions and documentations, please refer to the wiki page. MAGeCK is developed and maintained by Wei Li and Han Xu from Dr. Xiaole Shirley Liu's lab at Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute and Harvard School of Public Health. We thank the support from Claudia Adams Barr Program in Innovative Basic Cancer Research to develop MAGeCK.

    Downloads: 93 This Week Last Update: See Project
  • KaNaPi Icon

    KaNaPi

    Educational Linux Distribution

    Main goals: * Prepare operating system based on Linux kernel and free software for use at home from scratch by building sources. Binary packages/images are also available. * Each package is installed in separate directory, so you can use different versions of applications and libraries by design. * There is only one user 'kanapi' with root permissions, so you don't have to login, remember passwords, etc. * Simple configuration * Automatic compilation.

  • OpenPR Icon

    OpenPR

    OpenPR stands for Open Pattern Recognition project and is intended to be an open source library for algorithms of image processing, computer vision, natural language processing, pattern recognition, machine learning and the related fields.

  • spglib

    Spglib is a C-library written for finding crystal symmetry. Symmetry operation, space group, etc, can be obtained using this symmetry finder. It is easy to include this library to your code. For more information, See, http://spglib.sourceforge.net/

  • SmartWin++

    SmartWin++ is a C++ template GUI library written to give the flexibility of the Windows API without the hassle and lack of typesafety that MFC/WTL delivers. A flexible, expandable abstraction of the Windows API (formerly Win32 API).

  • Modular Audio Recognition Framework

    MARF is a general cross-platform framework with a collection of algorithms for audio (voice, speech, and sound) and natural language text analysis and recognition along with sample applications (identification, NLP, etc.) of its use, implemented in Java.

  • SIVIC Icon

    SIVIC

    SIVIC is an open-source, standards-based software framework and application suite for processing and visualization of DICOM MR Spectroscopy data. Through the use of DICOM, SIVIC aims to facilitate the application of MRS in medical imaging studies.

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