Search Results for "bcftools-windows"
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Showing 1021 open source projects for "bcftools-windows"
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Cut Data Warehouse Costs by 54%BigQuery delivers 54% lower TCO with exabyte scale and flexible pricing. Free migration tools handle the SQL translation automatically.
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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Open Science
Open Science is an open-source, local-first, model-agnostic research
Open Science is an open-source, local-first AI research workbench built for scientific discovery on macOS, Windows, and Linux. Researchers can describe a task in plain language and let an agent inspect files, execute Python or R, search the web, and call scientific data connectors. The system is model-agnostic, allowing users to connect supported providers, compatible gateways, or subscription-based backends. It produces reproducible reports, tables, figures, and other artifacts inside a unified project workspace. ... -
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Stellarium
GPL software which renders realistic skies in real time
Stellarium is a free GPL software which renders realistic skies in real time with OpenGL. It is available for Linux/Unix, Windows and macOS. With Stellarium, you really see what you can see with your eyes, binoculars or a small telescope. Stellarium is a free open source planetarium for your computer. It shows a realistic sky in 3D, just like what you see with the naked eye, binoculars or a telescope. Plugin system adding artifical satellites, ocular simulation, telescope control and more. ... -
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Local Deep Research
95% on SimpleQA (e.g. Qwen3.6-27B on a 3090)
Local Deep Research is an open-source AI-powered research assistant designed to perform deep, iterative investigations by combining large language models with multi-source search capabilities. It runs locally, giving users full control over their data, privacy, and infrastructure while supporting both local and cloud-based LLMs. The system breaks down complex queries into smaller steps, performs parallel searches across web and academic sources, and generates structured, citation-backed... -
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Calibre-Web
Web app for browsing, reading and downloading eBooks stored in Calibre
Calibre-Web is a web app providing a clean interface for browsing, reading and downloading eBooks using an existing Calibre database. User management with fine-grained per-user permissions. User Interface in Brazilian, Czech, Dutch, English, Finnish, French, German, Greek, Hungarian, Italian, Japanese, Khmer, Polish, Russian, simplified and traditional Chinese, Spanish, Swedish, Turkish, Ukrainian. Filter and search by titles, authors, tags, series and language. Support for editing eBook... -
Custom VMs From 1 to 96 vCPUs With 99.95% UptimeLive migration and automatic failover keep workloads online through maintenance. One free e2-micro VM every month.
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eLabFTW
Open source electronic lab notebook for research labs
eLabFTW is a modern, open-source electronic laboratory notebook (ELN) that helps research teams store, organize, and manage experimental records and laboratory data from a central web interface. Designed for scientific environments, the software provides a secure, browser-accessible platform where users can log protocols, results, and observations in structured records that replace traditional paper notebooks. Beyond simple experiment journaling, eLabFTW includes an inventory database for... -
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Device Activity Tracker
A phone number can reveal whether a device is active
Device Activity Tracker is a platform created to monitor and log the activity of digital devices across networks, giving users visibility into usage patterns, connection events, app launches, and interaction timelines that can be applied for security monitoring, parental oversight, productivity tracking, or device lifecycle analytics. It integrates with devices via sensors or APIs, continually capturing activity metrics and reporting them to a centralized dashboard that visualizes patterns... -
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Linux command
Linux command encyclopedia search tool
Linux command encyclopedia search tool, the content includes Linux command manual, detailed explanation, study, and collection. The current warehouse has collected more than 570 Linux commands. It is a non-profit warehouse. It has generated a web site for easy use. Currently, the site does not have any advertisements. The content includes Linux command manuals, detailed explanations, and learning. Very worthy collection of Linux command quick reference manual. The copyright belongs to the... -
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Zotero
Tool to help you collect, organize, annotate, cite, and share research
Zotero is a powerful, free, open-source research management application designed to help students, academics, and professionals collect, organize, annotate, cite, and share research sources and materials for papers, projects, or books. It can save web pages, PDFs, books, articles, and more with metadata, automatically extract bibliographic information, and organize items into collections and tag systems, while supporting notes and annotations directly alongside references. Zotero’s interface... -
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Awesome Mac
Collect premium software in various categories
Now we have become very big and different from the original idea. Here we collect awesome macOS software in various categories. Feel free to star and fork. Reading and writing tools, text editors, office, markdown tools, note-taking, journaling. Ebooks, RSS, developer tools, IDEs, developer utilities, etc. Regular expression editors, API development and analysis, network analysis, command line tools, frameworks for hybrid applications, version control. Virtualization, databases, design and... -
Ship Agents FasterGemini Enterprise Agent Platform lets you rapidly build, scale, govern and optimize production-ready agents grounded in your organization's data. The platform enables developers to build custom or pre-built agents for virtually any use case. New customers get $300 in free credits.
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Pro Git
Pro Git 2nd Edition
Welcome to the second edition of the Pro Git book. The entire Pro Git book, written by Scott Chacon and Ben Straub and published by Apress, is available here. All content is licensed under the Creative Commons Attribution Non Commercial Share Alike 3.0 license. Print versions of the book are available on Amazon.com. What is “version control”, and why should you care? Version control is a system that records changes to a file or set of files over time so that you can recall specific versions... -
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Stanza
Stanford NLP Python library for many human languages
Stanza is a collection of accurate and efficient tools for the linguistic analysis of many human languages. Starting from raw text to syntactic analysis and entity recognition, Stanza brings state-of-the-art NLP models to languages of your choosing. Stanza is a Python natural language analysis package. It contains tools, which can be used in a pipeline, to convert a string containing human language text into lists of sentences and words, to generate base forms of those words, their parts of... -
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Concordia
Crowdsourcing platform for full text transcription and tagging
Concordia is a platform for crowdsourcing transcription and tagging of text in digitized images. It was developed by the Library of Congress so that volunteers of all backgrounds could transcribe and tag digitized images of manuscripts and typed materials from the Library’s collections that could not otherwise be done by optical character recognition. -
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Ray Tracing in One Weekend Book Series
The Ray Tracing in One Weekend series of books
The Ray Tracing in One Weekend series of books are now available to the public for free online. They are now released under the CC0 license. This means that they are as close to public domain as we can get. (While that also frees you from the requirement of providing attribution, it would help the overall project if you could point back to this web site as a service to other users.) These books are formatted for printing directly from your browser, where you can also (on most browsers) save... -
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OpenScience
The open-source AI workbench for scientific research
OpenScience is an open-source AI workbench for scientific research. It lets users give an agent a research goal, then have it read literature, form hypotheses, write and run code, run experiments, analyze results, and write up findings. The workspace runs in the browser and includes a file tree, editor, terminal, session history, and scientific rendering for molecules, structures, genomes, and plots. It supports frontier, open-weight, and local models through bring-your-own-key provider... -
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PageLM
PageLM is a community driven version of NotebookLM
PageLM is an open-source AI-powered education platform that transforms study materials into interactive learning experiences inspired in part by the NotebookLM style of knowledge interaction. It is built to help students, educators, and researchers turn documents and topics into more engaging forms of study rather than leaving content in static notes or isolated files. The platform includes a broad set of learning tools such as contextual chat, Cornell-style note generation, flashcards,... -
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Archivematica
Free and open-source digital preservation system
Archivematica is a web- and standards-based, open-source application which allows your institution to preserve long-term access to trustworthy, authentic, and reliable digital content. Our target users are archivists, librarians, and anyone working to preserve digital objects. You are free to copy, modify, and distribute Archivematica with attribution under the terms of the AGPLv3 license. Archivematica is an open-source application based on recognized standards that makes it possible to... -
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Hacker Laws
Laws, theories, principles and patterns useful to developers
...Principles and laws to follow such as: If a program is made up of two parts, part A, which must be executed by a single processor, and part B, which can be parallelised, then we see that adding multiple processors to the system executing the program can only have a limited benefit. It can potentially greatly improve the speed of part B - but the speed of part A will remain unchanged. Also, theories like The Broken Windows Theory, which suggests that visible signs of crime (or lack of care of an environment) lead to further and more serious crimes (or further deterioration of the environment). Conway's Law suggests that the technical boundaries of a system will reflect the structure of the organisation. These among others, are featured in this project. -
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Megatron-LM
Ongoing research training transformer models at scale
Megatron-LM is a GPU-optimized deep learning framework from NVIDIA designed to train extremely large transformer-based language models efficiently at scale. The repository provides both a reference training implementation and Megatron Core, a composable library of high-performance building blocks for custom large-model pipelines. It supports advanced parallelism strategies including tensor, pipeline, data, expert, and context parallelism, enabling training across massive multi-GPU and... -
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nanoGPT
The simplest, fastest repository for training/finetuning models
NanoGPT is a minimalistic yet powerful reimplementation of GPT-style transformers created by Andrej Karpathy for educational and research use. It distills the GPT architecture into a few hundred lines of Python code, making it far easier to understand than large, production-scale implementations. The repo is organized with a training pipeline (dataset preprocessing, model definition, optimizer, training loop) and inference script so you can train a small GPT on text datasets like Shakespeare... -
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Open Source Vizier
Python-based research interface for blackbox
Open Source (OSS) Vizier is a Python-based interface for blackbox optimization and research, based on Google’s original internal Vizier, one of the first hyperparameter tuning services designed to work at scale. Allows a user to setup an OSS Vizier Server, which can host black-box optimization algorithms to serve multiple clients simultaneously in a fault-tolerant manner to tune their objective functions. Defines abstractions and utilities for implementing new optimization algorithms for... -
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AutoResearchClaw
Autonomous research from idea to paper. Chat an Idea. Get a Paper 🦞
AutoResearchClaw is an open-source framework designed to automatically generate full academic research papers from a single idea or topic. Built in Python, it orchestrates a multi-stage research pipeline that gathers literature, formulates hypotheses, runs experiments, analyzes results, and writes the final paper. The system retrieves real academic references from sources such as arXiv and Semantic Scholar to ensure credible citations. It can automatically generate code for experiments, run... -
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SwiftLint
A tool to enforce Swift style and conventions
A tool to enforce Swift style and conventions, loosely based on the now archived GitHub Swift Style Guide. SwiftLint enforces the style guide rules that are generally accepted by the Swift community. These rules are well described in popular style guides like Ray Wenderlich’s Swift Style Guide. SwiftLint hooks into Clang and SourceKit to use the AST representation of your source files for more accurate results. You might want to move your SwiftLint phase directly before ‘Compile Sources’... -
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Awesome production machine learning
Curated list of awesome open source libraries
This repository contains a curated list of awesome open source libraries that will help you deploy, monitor, version, scale, and secure your production machine learning. Open-source frameworks, tutorials, and articles curated by machine learning professionals. Open-source bias audit toolkits for data scientists, machine learning researchers, and policymakers to audit machine learning models for discrimination and bias, and to make informed and equitable decisions around developing and... -
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Kubernetes Handbook
Cloud native application architecture practice handbook
Cloud native is a behavioral method and design concept. In its essence, all behaviors or methods that can improve resource utilization and application delivery efficiency on the cloud are cloud-native. The history of cloud computing is a history of cloud native. Kubernetes opened the prelude to cloud native 1.0. The emergence of service mesh Istio led to microservices in the post-Kubernetes era. The rise of serverless has enabled cloud native to advance from the infrastructure layer to the... -
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rustlings
Small exercises to get you used to reading and writing Rust code
This project contains small exercises to get you used to reading and writing Rust code. This includes reading and responding to compiler messages! Alternatively, for a first-time Rust learner, there are several other resources, like The Book, which is the most comprehensive resource for learning Rust, but a bit theoretical sometimes. You will be using this along with Rustlings! And also, Rust By Example, to learn Rust by solving little exercises! It's almost like rustlings, but online. You...
