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ffnet is a fast and easy-to-use feed-forward neural network training solution for python. Many nice features are implemented: arbitrary network connectivity, automatic data normalization, very efficient training tools, network export to fortran code. Now ffnet has also a GUI called ffnetui.44 weekly downloads
COmputational fluid dyNamics STRUctured grid CreaTor for 2D airfoils20 weekly downloads
BlockIt provides a Python framework to scan and parse a program file into constituent nested blocks, however defined, forming a block tree of your code and can be used as a mechanism to "extend" in some sense, the underlying programming language.3 weekly downloads
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Computational electromagnetics software. Uses surface Method of Moments, enhanced by using the Multilevel Fast Multipole Method. Code is parallelized and runs on laptops, desktops and clusters. The code precision is adjustable, it is fast and uses little memory. CFIE is used for closed surfaces, and EFIE for open PEC surfaces. Can function on GMSH, GiD and ANSYS meshes.8 weekly downloads
Interpretation of Biomolecular MD simulations6 weekly downloads
PySCeS is the Python Simulator of Cellular Systems1 weekly downloads
Modular System for Shelves and Coasts2 weekly downloads
Tool to translate Nastran to CodeAster file.1 weekly downloads
SMMP (Simple Molecular Mechanics for Proteins) is a program library for protein simulations with an emphasis on advanced Monte Carlo algorithms. It includes various force fields to calculate the energy of a protein and protein-protein interactions.1 weekly downloads
ByoDyn (http://cbbl.imim.es/ByoDyn) is a software tool for the study of biochemical networks within the framework of systems biology. SBML compatible, ByoDyn is a group effort of the Computational Biochemistry and Biophysics Lab.
Pre-Alpha Console distro for high performance Linux computing.
Famms is a Python module for applying the method of manufactured solutions (MMS) to PDE simulators written in C/C++, Fortran, and Python.
Glimmer is an open source (GPL) three-dimensional thermomechanical ice sheet model, designed to be interfaced to a range of global climate models.
This is an educational example of how to run a numerical model (in Fortran) from Python, including data handling (netCDF), configuration with a config file, etc.
Open-GMF is an open Ground Water Modeling Framework for hydrogeologists and reservoir engineers. It is an extensible development environment for finite-difference, finite-element, and finite-volume models tailored to specific problems.
Application Integration for HPC Multiphysics
Telluride is a Los Alamos National Laboratory project for simulation of metal casting and welding - free-surface incompressible flow with heat transfer (conductive, convective, and radiative), phase change (melting and solidification), and other physics.
Trek7 the original multiplayer network star trek game from the early-mid 70s. We are hoping to revive this classic (no, its not netrek/mtrek, not even close). hopefully the SF community can help port this to modern day networks.