A universal instant messaging (IM) program
See https://pidgin.im/about/ for more information. Pidgin is an instant messaging program which lets you log in to accounts on multiple chat networks simultaneously. It runs on Windows, Linux, and other UNIX operating systems. Pidgin is compatible with the following chat networks out of the box: AIM, ICQ, Google Talk, Jabber/XMPP, MSN Messenger, Yahoo!, Bonjour, Gadu-Gadu, IRC, MXit, Novell GroupWise Messenger, Lotus Sametime, SILC, SIMPLE, MySpaceIM, and Zephyr. It is written in C and makes heavy use of GLib and GTK+. Finch is a command line instant messaging program. It also lets you log in to accounts on multiple chat network simultaneously, and it is compatible with the same chat networks as Pidgin. It is written in C and makes heavy use of GLib and ncurses.
A comprehensive software suite for reading barcodes. Supports EAN/UPC, Code 128, Code 39, Interleaved 2 of 5 and QR Code. Includes libraries and applications for decoding captured barcode images and using a video device (eg, webcam) as a barcode scanner.
Fast Artificial Neural Network Library is a free open source neural network library, which implements multilayer artificial neural networks in C with support for both fully connected and sparsely connected networks. Cross-platform execution in both fixed and floating point are supported. It includes a framework for easy handling of training data sets. It is easy to use, versatile, well documented, and fast. Bindings to more than 15 programming languages are available. An easy to read introduction article and a reference manual accompanies the library with examples and recommendations on how to use the library. Several graphical user interfaces are also available for the library.
Design PCR primers from DNA sequence. Widely used (190k Google hits for "primer3"). From mispriming libraries to sequence quality data to the generation of internal oligos, primer3 does it. C&perl. Developers/testers/documenters needed.
UrJTAG aims to create an enhanced, modern tool for communicating over JTAG with flash chips, CPUs, and many more. It is a descendant of the popular openwince JTAG tools with a lot of additional features and enhancements.
A multimedia authoring and processing framework and a video playout server for television broadcasting.
MSLB is a crossplatform Simple Logbook program / application to write work logs or even a diary. MSLB can also use a bunch of presets that you can add with a simple doubleclick :) Logs get saved in a simple folder system. And its all portable.
z390 Portable Mainframe Assembler and Emulator
z390 Portable Mainframe Assembler and Emulator
The Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to the open mzML/mzXML formats.
Crystal Space is an Open Source 3D SDK for Unix, Windows, and MacOS/X. It renders with OpenGL and features GLSL shaders, CG shaders, deferred rendering, dynamic shadows, bullet based physics library, terrain engine, skeleton based animation meshes, exporter for Blender, portals, etc...
The PDL module gives standard perl the ability to COMPACTLY store and SPEEDILY manipulate the large N-dimensional data sets that are the bread and butter of scientific computing.
Redland is a set of object-based, modular and portable C RDF libraries providing RDF APIs for the graph, triple storage (librdf), RDF/XML parsing and serializing (Raptor), SPARQL RDF querying (Rasqal). Language APIs in Perl, PHP, Python, Ruby and others.
Second generation of XMMS music player.
Master/node to gather and graph "everything" on your systems using Tobi Oetiker's rrdtool. It can optionally warn your surveillance software. This software package was originally called LRRD. The project. Please see http://munin-monitoring.org/
City of Hope CpG Island Analysis Pipeline
COHCAP (City of Hope CpG Island Analysis Pipeline) is an algorithm to analyze single-nucleotide resolution methylation data (Illumina 450k methylation array, targeted BS-Seq, etc.). It provides QC metrics, differential methylation for CpG Sites, differential methylation for CpG Islands, integration with gene expression data, and visualization of methylation values. Please note: 1) The standalone version of COHCAP is no longer being updated. Please see the Bioconductor version: http://bioconductor.org/packages/release/bioc/html/COHCAP.html 2) In addition to the original NAR paper, please see the following links: Benchmarks: http://www.nature.com/protocolexchange/protocols/2965#/introduction Protocol Exchange Files: http://sourceforge.net/projects/cohcap/files/Protocol_Exchange_Example.zip 3) Bioconductor Custom Annotation Files (including EPIC Array): https://sourceforge.net/projects/cohcap/files/additional_Bioconductor_annotations.zip/download
A multi-purpose extensible self-adaptive evolutionary algorithm
MicroGP (uGP) is a versatile optimizer able to outperform both human experts and conventional heuristics in finding the optimal solution of hard problems. It is an evolutionary algorithm since it mimics some principles of the Neo-Darwinian paradigm.
Squeezer is a multi-dimensional logfile analyzer for Squid web cache server. It measures transfer speed from Squid, source servers and other caches and gives an information useful for tuning Squid and web cache hierarchy or mesh.
A Free Hosting Control Panel for Linux intended to replace the need for expensive software such as Ensim, CPanel & Plesk. It uses Apache, Postfix, MySQL & other projects like AWStats and phpMyAdmin. The GUI is coded in PHP, and the backend in Perl & Bash
Squid Graph is a free, simple, yet powerful Squid v2 native logfile analysis tool that generates reports with graphical representation of the proxy server's traffic, somewhat like the popular MRTG tool.
GGI stands for "General Graphics Interface", and it is a project that aims to develop a reliable, stable and fast graphics system that works everywhere. We want to allow any program using GGI to run on any platform requiring at most a recompile.
ACDK - Artefaktur Component Development Kit - is a platform independent C++-framework similar to Java or C#/.NET for generating distributed and scriptable components and applications.
openBoat is a web based personal project manager with an emphasis on expenses rather than time. Information is stored in an SQL database. All you need is a computer with a web server that supports the Perl language.
Recursive mapping/discovery of network devices via CDP/OSPF
CLI based, recursive mapping/discovery of network devices via SNMP(CDP/OSPF/BGP MIBs). SNMP(LLDP MIBs), telnet, and SSH are to follow, along with multi-vendor support (right now only supports cisco devices). Requires Perl and Net::SNMP, Net::SSH, and Net::Telnet modules.
A tool to download and configure Voltcraft DL-141TH devices.
This is a Perl application enabling downloading and configuring the Voltcraft DL-141TH temperature and humidity sensors device. Targeted at Operating Systems supporting libusb. This application exists thanks to reverse engineering.
Simple gui program to copy a file or dir, verify and save hash
This is a simple program to copy files or directories and verify the copied file with hashes. Hash is saved in .hash file compatible with md5sum(hashSUM). It has a gui and work on Linux and windows (the script should work even on Mac). Hash is computed while reading so sources file are read only once. The executables have been created using pp : it creates an executable similar to an autoextract-zip with the script, the perl engine and all libraries. I'm using it under linux to copy GigaBytes files from ntfs internal hd to ntfs external hd with an old atom eepc with 8.5MB/sec speed : is it good? With more powerful pc speeds are 3 times better. Can manage very long path (>260 char) under windows (under linux is default : magic linux!) in main windows and in primary multi-file-dir selector.