A universal instant messaging (IM) program
See https://pidgin.im/about/ for more information. Pidgin is an instant messaging program which lets you log in to accounts on multiple chat networks simultaneously. It runs on Windows, Linux, and other UNIX operating systems. Pidgin is compatible with the following chat networks out of the box: AIM, ICQ, Google Talk, Jabber/XMPP, MSN Messenger, Yahoo!, Bonjour, Gadu-Gadu, IRC, MXit, Novell GroupWise Messenger, Lotus Sametime, SILC, SIMPLE, MySpaceIM, and Zephyr. It is written in C and makes heavy use of GLib and GTK+. Finch is a command line instant messaging program. It also lets you log in to accounts on multiple chat network simultaneously, and it is compatible with the same chat networks as Pidgin. It is written in C and makes heavy use of GLib and ncurses.
Design PCR primers from DNA sequence. Widely used (190k Google hits for "primer3"). From mispriming libraries to sequence quality data to the generation of internal oligos, primer3 does it. C&perl. Developers/testers/documenters needed.
Open Watcom C/C++ compilers and tools Fork
C/C++ compilers and tools to compile and build for targets DOS 16/32-bit, RDOS, Windows 16/32-bit, OS/2 16/32 bit, Linux 32-bit (x86), Netware running on host OS DOS, Windows 16/32/64-bit, OS/2, Linux 32/64-bit (x86/x64)
wxCode project is a collection of reusable components based on the cross-platform wxWidgets GUI toolkit. The project provides various tools and facilities for building, maintaining and releasing wxWidgets-based code. Visit the website for more info. Note: As of January 2018 this project has been retired.
UrJTAG aims to create an enhanced, modern tool for communicating over JTAG with flash chips, CPUs, and many more. It is a descendant of the popular openwince JTAG tools with a lot of additional features and enhancements.
The PDL module gives standard perl the ability to COMPACTLY store and SPEEDILY manipulate the large N-dimensional data sets that are the bread and butter of scientific computing.
The NCID (Network Caller ID) project is Caller ID (CID) distributed over a network. The project contains the NCID package and 4 optional client packages. Each package is described at the NCID web site. A non-inclusive list of 3rd party addons is also available at the web site Available Packages: NCID - contains the server, gateways, and a client with output modules LCDncid - a client that uses LCDproc to display Caller ID on a LCD display NCIDandroid - a client and gateway combination for Android devices NCIDdisplay - a homebrew client that displays on large LED modules NCIDpop - a popup client for Windows, Mac, and Linux
This is a C library to check the validity of German and Austrian Bank Account Numbers. All currently defined test methods by Deutsche Bundesbank (Dec 2017: 00 to E4) are implemented. Modules for AWK, Perl, PHP, Python, Ruby, C#.net and VB.net are included too. The package includes also an IBAN converter to generate (german) IBANs and BICs from account data. All currently defined IBAN rules by Deutsche Bundesbank are implemented (Dec 2017: 57 rules) and tested against independent solutions.
The Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to the open mzML/mzXML formats.
Tools for FPGA development and IP cores. This project provides tools, cores and documentation to develope FPGA applications. The project focuses on VHDL.
A multimedia authoring and processing framework and a video playout server for television broadcasting.
Master/node to gather and graph "everything" on your systems using Tobi Oetiker's rrdtool. It can optionally warn your surveillance software. This software package was originally called LRRD. The project. Please see http://munin-monitoring.org/
Easy lead sheets from text input
ChordPro creates elegant, stafless lead sheets for musicians needing only chords and lyrics. It processes plain text input in ChordPro format and it is a rewrite of the old though still popular Chord/Chordii programs.
Open-source automated grading of programming assignments
Web-CAT is a plug-in based web application for automatically grading programming assignments in many programming languages. This project also provides Eclipse plugins for electronic submission and feedback services directly from the Eclipse IDE. We now use github for source code control (https://github.com/web-cat), although all file releases are still provided here through SourceForge. The CVS repository here is for archival purposes only.
German Template for Bugzilla
German Template for Bugzilla. Bugzilla is a bugtracking system by Mozilla.org. This project contains the files needed for a German interface for it. To install, extract the "de" directory in the package, and place it and its contents into Bugzilla's "template" directory, so that it sits alongside the "en" directory Bugzilla ships with.
Various small and useful command-line utilities
The littleutils include a duplicate file finder (repeats), image optimizers (opt-jpg, opt-png, opt-gif, recomp-jpg), file rename tools (lowercase, uppercase, pren), archive recompressors (to-gzip, to-bzip, to-7zip, to-lzma, to-lzip, to-xz), a tempfile utility (tempname), file property tools (filedate, filemode, filenode, fileown, filesize, and lrealpath), and others. See the README file for more details.
husky is a bunch of os-independent software for fidonet. It consitsts of tosser hpt, fileechoprocessor htick, message editor msged TE, libraries fidoconfig, smapi etc. Russian documentation may be found in Wiki http://sf.net/apps/mediawiki/husky/
Source code from the Research Institute for Signals, Systems and Computational Intelligence http://fich.unl.edu.ar/sinc
Software tools for processing taxonomic descriptions in DELTA format
The Free DELTA Project is a free, open-source, software alternative for a generic system to the processing of taxonomic descriptions based on the DELTA (DEscription Language for TAxonomy) format.
General Number Field Sieve implementation
The Sound Description Interchange Format (SDIF) is an established standard for the interchange of sound descriptions and analysis data. This project provides libraries, SDIF (in C) and Easdif (in C++), tools, and wrappers to read and write SDIF files.
A collection of open source software developed or modified by myself.
City of Hope CpG Island Analysis Pipeline
COHCAP (City of Hope CpG Island Analysis Pipeline) is an algorithm to analyze single-nucleotide resolution methylation data (Illumina 450k methylation array, targeted BS-Seq, etc.). It provides QC metrics, differential methylation for CpG Sites, differential methylation for CpG Islands, integration with gene expression data, and visualization of methylation values. Please note: 1) The standalone version of COHCAP is no longer being updated. Please see the Bioconductor version: http://bioconductor.org/packages/release/bioc/html/COHCAP.html 2) In addition to the original NAR paper, please see the following links: Benchmarks: http://www.nature.com/protocolexchange/protocols/2965#/introduction Protocol Exchange Files: http://sourceforge.net/projects/cohcap/files/Protocol_Exchange_Example.zip 3) Bioconductor Custom Annotation Files (including EPIC Array): https://sourceforge.net/projects/cohcap/files/additional_Bioconductor_annotations.zip/download
A multi-purpose extensible self-adaptive evolutionary algorithm
MicroGP (uGP) is a versatile optimizer able to outperform both human experts and conventional heuristics in finding the optimal solution of hard problems. It is an evolutionary algorithm since it mimics some principles of the Neo-Darwinian paradigm.
Extract and Convert Juniper Firewall Policies to CSV
Perl script that connect via SSH to your Juniper SRX firewall and extract the firewall rules, Parses them and produces a local csv file for import into excel. Written to fill a requirement, If you fix it or make it better please let me know?