MUMmer is a modular system for the rapid whole genome alignment of finished or draft sequence. This package provides an efficient suffix tree library, seed-and-extend alignment, SNP detection, repeat detection, and visualization tools.
Collectl is a light-weight performance monitoring tool capable of reporting interactively as well as logging to disk. It reports statistics on cpu, disk, infiniband, lustre, memory, network, nfs, process, quadrics, slabs and more in easy to read format.
AMOS is a collection of tools for genome assembly
AMOS is a collection of tools and class interfaces for the assembly of DNA reads. The package includes a robust infrastructure, modular assembly pipelines, and tools for overlapping, consensus generation, contigging, and assembly manipulation.
Vipul's Razor is a distributed, collaborative, spam detection and filtering network. The primary focus of the system is to identify and disable an email spam before its injection and processing is complete.
The Introspector enables the programming tools that deal with source code such as the compiler to communicate in a standard and neutral manner reducing the accidental cost of programming. http://github.com/h4ck3rm1k3/
This is a C library to check the validity of German and Austrian Bank Account Numbers. All currently defined test methods by Deutsche Bundesbank (Dec 2017: 00 to E4) are implemented. Modules for AWK, Perl, PHP, Python, Ruby, C#.net and VB.net are included too. The package includes also an IBAN converter to generate (german) IBANs and BICs from account data. All currently defined IBAN rules by Deutsche Bundesbank are implemented (Dec 2017: 57 rules) and tested against independent solutions.
This project is to provide a repository of Perl scripts, or links to where such Perl scripts might be found, for use on Fidonet Technology Networks (FTN) systems. A longer term goal is for the development of Perl Module(s), using the "FTN" namespace.
Binary Perl Distribution
Binary perl distribution with pre-built modules for Wx, DBD::Pg and DBD::mysql.
OMLNg is a small newsletter sending program. It provides non technical people the ability to send rich messages to groups and works with common office software/files. It is aimed at people that do not have access to such service on a mail server.
Win32::SystemInfo is a Perl module that can get total/free memory on Win32 systems, including installed RAM and page file. It will also access processor information, including family (386,486,etc), speed, name, vendor, and revision information.
screenie - screen(1) session handler (wrapper)
Overview of pre-defined compiler macros for standards, compilers, operating systems, and hardware architectures.
A web-based software package for comparative genomics
Sybil is a web-based software package for comparative genomics
Command-line tool for database saving/displaying of instant messaging history written in Perl.
Learn Linux sysadmin from Windows PC using this Debian Virtual Box
An Oracle Virtual Box image, packaged as an appliance to be downloaded and run anywhere. Created on 32-bit Windows XP & Oracle Virtual box 4.2.6. The VM is a Debian Squeeze 6.0.7 i386. md5sum: 85ab2066b7381af12b741a3d4dedf6c9 This file is to be specifically used along with this other great project: http://nixsrv.com/llthw There is a 64bit Debian image similar to mine in that link above. To benefit those like me who still have 32bit machines, I have created and uploaded this image. This is your fast track to getting up and running in no time. I hope it benefits people with 32bit machines who want to take advantage of the tutorial ASAP. If you found the image helpful, please leave a short note of appreciation (and a thanks to the tutorial maker). I would like that very much. Thanks and Ciao.
Having moved colmux to collect as of v4.8.3, the only utility here is colplot, which may ultimately simply become a tarball of the same name once the dust over this last reorganization settles.
innotop is a powerful monitor for MySQL queries and status information. It is now hosted at http://code.google.com/p/innotop.
PumpedUp is a group of programs that are used to gather system performance data on a second by second basis and create real time or static graphical web pages. (Does Nagios alarms based on performance too!) Executables for Lin, Win, Solaris included.
Statistics modules in Perl Data Language, with a quick-start guide for non-PDL people. They make the PDL shell work like R, but with PDL threading (fast automatic iteration) of procedures including t-test, linear regression, and k-means clustering.
Perl bindings to the Modern OpenGL API
The Perl OpenGL 2 module provides bindings to the modern OpenGL APIs for use from the perl language.
Webtunnel is an HTTP tunnel with some unique features: it runs in the context of a web server; it uses simple requests/responses for proxy traversal; and it is multi-threaded to allow many parallel connections to many destinations simultaneously.
A cross-platform interface for the *.mfj file format.
mobcalPARSER is a command line based PERL frontend/interface for MOBCAL with limited wrapper functionality. "MOBCAL - A Program to Calculate Mobilities" is available from Professor Martin F. Jarrold's webpage http://www.indiana.edu/~nano/software.html.
XSH is a powerfull command-line XML editing tool/programming language in the manner of Unix shell interpreters and line-oriented text editors like ed which can be used either interactively or for batch-mode XML processing.
Command line utility for sorting MP3 files based on Tag information. Written in Perl and available as a stand-alone executable for Windows.
Build texts and documents bottom-up from building blocks using a language similar (and compatible with) that of GNU Make, in such a way that variants (e.g. translations) can be generated by overwriting parts of the text with minimal redundancy.