Fast C++ matrix library with easy to use functions and syntax, deliberately similar to Matlab. Uses template meta-programming techniques. Also provides efficient wrappers for LAPACK, BLAS and ATLAS libraries, including high-performance versions such as OpenBLAS and Intel MKL. Useful for machine learning, pattern recognition, signal processing, bioinformatics, statistics, finance, etc. For more details, see http://arma.sourceforge.net
A symbolic framework for C++, Python and Octave implementing automatic differentiation by source code transformation in forward and reverse modes on sparse matrix-valued computational graphs.
GeographicLib is a small set of C++ classes for converting between geographic, UTM, UPS, MGRS, and geocentric coordinates, for gravity (e.g., EGM2008), geoid, and geomagnetic field (e.g., WMM2010) calculations, and for solving geodesic problems. For documentation, visit https://geographiclib.sf.io
BioSig is a software library for processing of biomedical signals (EEG, ECG, etc.) with Matlab, Octave, C/C++ and Python. A standalone signal viewer supporting more than 30 different data formats is also provided.
A file format for exchanging computational models in systems biology
The Systems Biology Markup Language (SBML) is an XML-based description language for representing computational models in systems biology. Visit the project web site to learn more.
An open source software-defined GNSS receiver
An open source software-defined Global Navigation Satellite Systems (GNSS) receiver written in C++ and based on the GNU Radio framework.
Cross platform electromagnetics finite element analyisis based on FEMM
Cross platform electromagnetics finite element analysis code, with very tight integration with Matlab/Octave. xfemm is a refactoring of the core algorithms of the popular Windows-only FEMM (Finite Element Method Magnetics, www.femm.info) to use only the standard template library and therefore be cross-platform. The codes can be used as a library, standalone executables, or through the advanced Matlab/Octave interface, which uses direct data exchange at the memory level rather than the original...
A MATLAB(R) Mex-DLL to SQLite Databases
Did you ever want to store your MATLAB(R) data in a SQL database? Nothing large, simply a few array or strutures in a few tables. Maybe a few indicies and everything manageable with SQL commands? Then msqlite will be the right choice for you! mksqlite connects the power of MATLAB(R) with the efficiency of the SQLite database engine. (See also https://github.com/AndreasMartin72/mksqlite)
CoRoPa stands for Computational Rough Paths. The aim of CoRoPa is to provide a software framework for various ideas related to Rough Path Theory, including rough differential equations and the digital description of serial data streams.
The Sound Description Interchange Format (SDIF) is an established standard for the interchange of sound descriptions and analysis data. This project provides libraries, SDIF (in C) and Easdif (in C++), tools, and wrappers to read and write SDIF files.
Toolbox for processing spinal cord MRI data
The Spinal Cord Toolbox is a comprehensive and open-source library of analysis tools for multi-parametric MRI of the spinal cord. List of contributors can be found here: https://sourceforge.net/p/spinalcordtoolbox/wiki/Home/
Yet Another Audio Feature Extractor is a toolbox for audio analysis. Easy to use and efficient at extracting a large number of audio features simultaneously. WAV and MP3 files supported, or embedding in C++, Python or Matlab applications.
The GetData library provides an API to interface with Dirfile databases. The Dirfile database format is designed to provide a fast, simple, scalable format for storing and reading binary, synchronously-sampled, time-ordered data.
DQ Robotics is an open-source (LGPLv3) standalone open-source Robotics library. It provides dual quaternion algebra, kinematic calculation algorithms in Python, MATLAB and C++ that can be applied in robot control. The library has a catkin package wrapper for use in ROS Indigo, and also provides a V-REP interface.
Scanning Probe Image Wizard - MATLAB Toolbox
.... A related open-source project SPIEPy (https://pypi.python.org/pypi/SPIEPy/) is developing a python library to for automated SPM imaged enhancement. SPIEPy brings many SPIW algorithms to the Python user.
Matlab interface to the Open Dynamics Engine (ODE)
MatODE is a simple Matlab toolbox for interfacing to the Open Dynamics Engine rigid body physics simulator (ODE, by Russell Smith), created by the Delft Biorobotics Lab (Delft University of Technology, Delft, The Netherlands). The system to be simulated is defined in an XML file, while the joint positions and motor signals can be sensed and actuated from a Matlab script. Examples are provided. Starting at version 0.30, MatODE is only available for Windows and Linux 64-bit. For older 32-bit...
C++, Matlab and Python library for Hidden-state Conditional Random Fields. Implements 3 algorithms: LDCRF, HCRF and CRF. For Windows and Linux, 32- and 64-bits. Optimized for multi-threading. Works with sparse or dense input features.
pp->gamma cross sections parametrization
This library contains the parametrization of pp->gamma cross section functions based on Phys.Rev. D90 (2014) 12, 123014 (astro-ph/1406.7369) work. The functions are written in Python, Fortran and Matlab. Please, if you use this library DO NOT reference to this webpage, instead reference to Phys.Rev. D90 (2014) 12, 123014 (astro-ph/1406.7369), "Parametrization of gamma-ray production cross-sections for pp interactions in a broad proton energy range from the kinematic threshold to PeV energies...
Open Source Implementations for 3D-Surface Characterisation Algorithms according to ISO 25178 (Geometric Product Specification) in verifiable pseudocode (MATLAB). Implementation of an XML-based file exchange format according to upcoming ISO 25178-72.
Elastic network models (ENMs) have been shown to generate the dominant functional equilibrium motions of biomolecules quickly and efficiently. MAVEN simplifies ENM generation, allows for diverse models to be used, and facilitates useful analyses.
ECOC PAK is a C++ Library for the Error Correcting Output Codes classification framework. It supports several coding and decoding strategies as well as several classifiers.
GLPKMEX - a Matlab MEX interface for the GLPK library Note: GLPKMEX is not currently compatible with glpk-4.49, or later. please use with glpk 4.40 - 4.48.
Moved to https://github.com/rdiankov/openrave An open-source, cross-platform, plugin-based robot planning environment for autonomous robotics. Includes services like collision detection, physics, (inverse) kinematics, sensors, robot controls, python bindings, and a network scripting environment.
A C++ library for the computation of bifurcation diagrams: it provides tools for the integration of systems of ODEs that depend on parameters. A Python interface is included.
Toolkit for Automatic Control and Dynamic Optimization
ACADO Toolkit is a software environment and algorithm collection for automatic control and dynamic optimization. It provides a general framework for using a great variety of algorithms for direct optimal control, including model predictive control, state and parameter estimation and robust optimization. ACADO Toolkit is implemented as self-contained C++ code and comes along with user-friendly MATLAB interface. The object-oriented design allows for convenient coupling of existing optimization...