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APBS is a software package for the numerical solution of the Poisson-Boltzmann equation, a popular continuum model for describing electrostatic interactions between molecular solutes over a wide range of length scales. <http://www.poissonboltzmann.org/>. Please register at http://goo.gl/LGVU5j before downloading!137 weekly downloads
Pyfort is a tool for creating extensions to the Python language with Fortran routines. It supports F77-interfaced routines now, with plans for supporting more of F90 later.5 weekly downloads
The Delta code is an nonlinear aeroelastic solver written in fortran 90. At the moment only vortex lattice aerodynamics is available but the hope is for a higher fidelity aerodynamic model to be developed for use in the current code. Linux and Unix.
The Optimized Sparse Kernel Interface (OSKI) Library provides automatically tuned sparse matrix kernels, for use by solver libraries and applications. OSKI is part of the BeBOP project on performance tuning and analysis at U.C. Berkeley. (Go Bears!)
ProgPorts is an administrative and easy user interface to hundreds of proteomics, molecular dynamics, and protein crystallography programs. It is a hybrid of the prog/setup system, developed at Johns Hopkins University, and GNU-Darwin ports system.
Telluride is a Los Alamos National Laboratory project for simulation of metal casting and welding - free-surface incompressible flow with heat transfer (conductive, convective, and radiative), phase change (melting and solidification), and other physics.