The CODESH (COllaborative DEvelopment SHell) project provides an automatic persistent logbook for sessions of personal command-line work by recording what and how is being done: for private use/reuse and for sharing selected parts with collaborators.
The Parallel Seismic Earth Imaging System (PSEIS) is designed for geophysical research and parallel processing of large datasets. Interoperation and emulation are used to leverage other seismic processing software, existing skills and infrastructure.
SaraB - Schedule And Rotate Automatic Backups. Supports the Towers of Hanoi, Grandfather-Father-Son, or any custom backup rotation strategy. Easy to use and highly configurable. SaraB utilizes the great backup program, DAR (Disk ARchive).
Online Hierarchical Storage Manager (OHSM) is the first attempt towards an enterprise level open source data storage manager which automatically moves data between high-cost and low-cost storage media.
hfterm - linux ham radio soundcard digimode program, can monitor and transmit PACTOR I (unique !), also AMTOR, GTOR, RTTY. Based on hfkernel by Tom Sailer, with graphic interface (gtk+), spectrum display, logbook, textmacros, English and German help.
This is Scibuntu, Ubuntu Linux for scientists and science students. Scibuntu is not just another Linux distribution. It is a script that adds scientific programs and other convinient tools to the plain desktop Ubuntu.
The Infomap NLP software performs automatic indexing of words and documents from free-text corpora, using a variant of LSA to enable information retrieval and other applications. It was developed by the Infomap Project at Stanford University's CSLI.
cifget is a DDLm dictionary import expansion utility, which generates expanded dictionaries that could be used when reading, writing, or validating CIF files
Design and Implementation of the Singhal token based mutual exclusion
[ Design and Implementation of the Singhal token based mutual exclusion algorithm in kernel-space of FreeBSD ] | Data & Network Security Lab (DNSL) | Room 501, Floor 5, | Department of Computer Engineering | Sharif University of Technology | Azadi Ave., Tehran, Iran Vahid Khodabakhshi <firstname.lastname@example.org> Vahid Ranjbar <email@example.com> Also see the Acknowledgement file Please send bugs to our e-mail
The RoboCup Team of Shanghai University (aka. Strive Team) is now devoting itself to the Humanoid League Contest. Many features like machine vision, pace generation, speech cognition, etc. of the humanoid robots is rising here in the following years.
DNase Hypersensitivity Connectivity Motif Enrichment in GeneExpression
What does it do? DHC-MEGE is a program designed for the identification of functional long-range cis elements such as enhancers from gene expression data. How does it work? DHC-MEGE takes a list of up- and down-regulated genes and extracts regions from a chromatin connectivity map which are predicted to physically associate with those genes. It then searches for over-represented sequence motifs and then reports instances of those motifs throughout the genome. What is the input? You need a list of up genes, down genes, a DNase hypersensitivity connectivity map (BED8 format) and genome sequence (fasta format). What is the output? The main output is the GMT file, which is a list of gene lists which details the occurance of sequence motifs across the hypersensitive regions of the genome. How can I use the output file? GMT files can be used in gene set enrichment analysis of the array/mRNA-seq experiment. More info in the manual.
The aim of the project is to enhance multicast in a MANET using IPv6.
The goal of this project is to develop a framework to test and measure the performance of IEEE 802.11 based devices. Currently we aims to address the issues related to protocol conformance testing for a device.
Green Scheduler uses popular HPC batch queues and standards BMC/IPMI connectors in order to turn off idle nodes and wake up when is needed using a complex function of temperature, rank position, and job queue requirements.
g4u is a bootfloppy/CD-ROM that allows easy cloning of a PC harddisks or partition to deploy a common setup on a number of PCs via FTP or local disk. As the harddisk/partition is processed as a image, any filesystem and operating system can be deployed.
Bioscape is a proposed collaborative framework for the generation consolidation and exchange of molecular biological text mining results.
A highly modular client remote/web services library written in Python supporting multiple protocols and transports through a unified interface. All modules are as independent as possible from each other to ensure high re-usability.
Various tools for creating annotated parallel corpora including pre-trained tagging and parsing models for various languages, sentence alignment tools and word alignment tools. Uplug also includes a web-based interface for interactive sentence and word alignment and scripts for indexing and querying parallel corpora using the Corpus Work Bench CWB. Download 'uplug-main' first and then add other packages.
A set of Unix command line tools for quick and convenient batch processing of tabular text files (a.k.a., tab-delimited, csv, or flat file format) with a header line. Provides delimiter and compression detection, column reference by name. * tblmap: per-line ("map") computation: derive columns through an expression, delete, reorder, filter rows. * tblred: compute ("reduce") aggregations (e.g., sum, average) over groups defined by key columns. * tbldesc: Summarize columns in file (e.g., proportion of character/numeric values, min/mean/median/max, missing values, correlation with a target column). * tbljoin: Relational join without the need of pre-sorting and column matching. * ... See HostedApps/MediaWiki for examples.
User-based CPU quota tool
CPU Balance is a Perl script to balance the CPU usage among users. It will allocate CPU resource to each user equally only by the command renice, no matter how many processes/threads a user runs. ################ # Basic Renice Goal ################ 1. User-based balance: every user get the same cpu percentage if they ask for more; 2. all the jobs of one user has the same NI; 3. NI of all jobs tend to move as large as possible when balanced; 4. No sudden change on NI. max change of NI of a proc <= 2. Only 1 user will be changed in a renice cycle. ################ # Advanced Features ################ 1. gid/uid/cmd based renicable filter 2. gid/uid based weighted cpu division: priority & punished user support
Zero Wine is a malware's behavior analysis tool. Just upload your suspicious PE file (windows executable) through the web interface and let it analyze the behaviour of the process.
TeXas assists the building process of LaTeX files and provides useful scripted features. It mainly acts as an automated build system. TeXbooklet creates booklets out of LaTeX files while TeXlayout creates a LaTeX file with a standard layout in it.
SURFnet IDS, a Distributed Intrusion Detection System (D-IDS). The goal is to provide an early warning system which lets system administrators correlate known and unknown exploits to attacks directed towards their networks.
This project implements an algorithm for segmenting protein sequences into smaller meaningful blocks. The method is based on the pure statistical approach and it uses an analogy between proteins and natural language.
This is an opensource project for the calculation of the mathematical constant Pi. If you are a mathematician or programer please contribute ideas or code for this project. Non professionals are also welcome to contribute.