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FFP (Feature frequency profile) is an alignment free comparison tool for phylogenetic analysis and text comparison. It can be applied to nucleotide sequences, complete genomes, proteomes and even used for text comparison.1 weekly downloads
gridHQ is a really simple, php-based grid computing infrastructure, allowing parallel map reduce computations on many parallel nodes.
NIKS (Needle in a K-stack) - detection of mutations in NGS data
AlienVault® Unified Security Management™ (USM™) is an innovative approach to security monitoring, delivered in a unified platform. The USM platform includes five essential security capabilities that provide resource-constrained organizations with everything they need for effective threat detection, incident response, and compliance management, in a single pane of glass.Advertisement
Boolean Expression Solver is a command-line utility that generates a truth table for a given Boolean expression.4 weekly downloads
Tools to build molecular-docking activity prediction models by PLS regression with iterative training and pose-selection. Descriptors include (i) docking score(s), (ii) pharmacophore features, (iii) multi-feature descriptors learned by decision trees.
CTAS package is a set of tools for the Computed Tomography (CT) and Tomosynthesis (TS) reconstruction for the parallel beam geometry (usually available at the synchrotron sources).
CDS plots and analyzes output from numerical climate models. It is capable of comparing climate model simulations and/or observational data. It consists mostly of a series of MathWorks Matlab language scripts and reads data in NetCDF format.
deals with the Networking Monitoring issues of all systems
ThousandEyes extends visibility across corporate networks as well as the public Internet, helping to solve issues from the branch through MPLS links and SIP trunks to service provider networks. Simulate pre-deployment capacity, monitor detailed performance metrics and see how QoS settings impact call quality.Advertisement
This project, Acme SAC, aims to package a version of Acme written for the Inferno operating system as a stand alone editor for multiple platforms. Currently only for Windows.
Chemiinformatics: ND qsar -- dimensions involved in biological activity are more than the tree dimensions our mind can easily perceive.
HPC cloud computing for OpenFOAM (R) users
SUBLEX is a little app, that is made for counting sublexical frequencies of sublexical units (orthographic and phonological syllables, bigrams/biphonemes, letters/phonemes).
Wide Area Network Emulator543 weekly downloads
Cloudbased voice solutions are common in enterprise networks and frustrating for operations teams to manage. Simplify VoIP monitoring by having a proactive analysis of on-prem, hybrid and UCaaS voice services. Try the ThousandEyes VoIP monitoring solution today, free.Advertisement
neos, a new OS to the world!
Bioinformatic tools for analyzing an orfeome using translated ORFs and compares each ORF to the provided Orfeome/Proteome. Our script uses NCBI BLAST run locally and MySQL as the main engines in a new and interisting way. It is designed specifically for Poxvirus genomes, and provides the VACV-COP nomenclature and Cowpox Ortholog groups per each ORF. The BLAST stats are generated when compared to the Proteome you provide. It can be easily adapted for other genomes.
The developed graphical interface is based on the SKILL language which is a Lisp dialect used as a scripting language and PCell (Parameterized Cells) description language used in many EDA software suites by Cadence Design Systems.1 weekly downloads
An open source malware analysis tool1 weekly downloads
Integrator for gEDA (GPL EDA) Suites & Bridge gEDA to Kicad3 weekly downloads
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ChesROMS is developing a ROMS model of the Chesapeake Bay to help in the prediction of Harmful Algal Blooms. We hope to catalyze a new method of community modeling with involvement beyond the core researchers of the ChesROMS project.3 weekly downloads
The CODESH (COllaborative DEvelopment SHell) project provides an automatic persistent logbook for sessions of personal command-line work by recording what and how is being done: for private use/reuse and for sharing selected parts with collaborators.
The Parallel Seismic Earth Imaging System (PSEIS) is designed for geophysical research and parallel processing of large datasets. Interoperation and emulation are used to leverage other seismic processing software, existing skills and infrastructure.
SaraB - Schedule And Rotate Automatic Backups. Supports the Towers of Hanoi, Grandfather-Father-Son, or any custom backup rotation strategy. Easy to use and highly configurable. SaraB utilizes the great backup program, DAR (Disk ARchive).3 weekly downloads
Online Hierarchical Storage Manager (OHSM) is the first attempt towards an enterprise level open source data storage manager which automatically moves data between high-cost and low-cost storage media.6 weekly downloads
hfterm - linux ham radio soundcard digimode program, can monitor and transmit PACTOR I (unique !), also AMTOR, GTOR, RTTY. Based on hfkernel by Tom Sailer, with graphic interface (gtk+), spectrum display, logbook, textmacros, English and German help.17 weekly downloads
This is Scibuntu, Ubuntu Linux for scientists and science students. Scibuntu is not just another Linux distribution. It is a script that adds scientific programs and other convinient tools to the plain desktop Ubuntu.5 weekly downloads