Suite of community detection algorithms based on Modularity
... Review E, 74(3):036104, 2006.  B. Ball et al, An efficient and principled method for detecting communities in networks, 2011. The suite is based upon the fast community algorithm implemented by Aaron Clauset <email@example.com>, Chris Moore, Mark Newman, and the R IGraph library Copyright (C) 2007 Gabor Csardi <firstname.lastname@example.org>. It also makes of the classes available from Numerical Recipies 3rd Edition W. Press, S. Teukolsky, W. Vetterling, B. Flanne
An open source spatio-temporal data mining library
Current functions: 1. The General Association Rule Mining Framework(GARMF) library, which support mining association rules from transactions(boolean, weighted, fuzzy), spatial datasets (vector and raster) and spatio-temporal datasets (raster snapshots). Besides it support incremental mining. 2. Rule Filtering Library (RFL), a library for rule evaluation. 3. Besides, DAP-Shell, a GUI shell for GARMF and RFL, will be provided. However I'll pay no more attention on it.
Rqt is a library for calling R functions within C++/Qt4 applications. The argument interface uses QVariant for flexible exchange of data to and from R. This allows R calls as if they were part of the local Qt environment.
Open Metaheuristic (oMetah) is a library aimed at the conception and the rigourous testing of metaheuristics (i.e. genetic algorithms, simulated annealing, ...). The code design is separated in components : algorithms, problems and a test report generator
R package for modelling anthropogenic deforestation
... and Binomial logistic regression models with variable time-intervals between land-cover observations. The two functions use embedded Gibbs samplers written in C++ with the Scythe statistical library to reduce computational time.
Library of functions used to model simple (one dimensional) liquid crystal cells
A C++ library to help build spatial simulations of infectious disease transmission with R routines to visualize output. Intended for the academic community. Separate sections of the library are closely linked to individual peer-reviewed articles.
Structlab is a machine learning C++ framework for structured domains, which provides a toolbox of learning methods and tools for preprocessing and visualization. It also provides a GUI to setup elaborate experiments in a visual and intuitive way.
Minimum Information for Protein Functionality Evaluation (MIPFE).
SIPES (Security Incident Pollicy Enforcement System) aims to provide an automated e-mail,XML and PKI based system for automated security policy enforcement based on statefull risk assesment and open exchange formats.