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  • CasADi Icon

    CasADi

    A symbolic framework for C++, Python and Octave implementing automatic differentiation by source code transformation in forward and reverse modes on sparse matrix-valued computational graphs.

  • CoolProp Icon

    CoolProp

    A cross-platform, open-source, alternative to NIST REFPROP. Based on reference-accuracy equations of state and transport property correlations for refrigerants like Water, CO2, R134a, Nitrogen, Argon, Ammonia, Air, R404a, R410a, Propane and many others. A selection of secondary working fluid properties are also available. Can also make use of REFPROP when available. In addition, calculations for Humid Air Properties based on ASHRAE RP-1485 are provided. Wrappers are available for MATLAB, Octave, Python, C#, Fortran and many more.

  • GeographicLib

    Geographic library

    GeographicLib is a small set of C++ classes for converting between geographic, UTM, UPS, MGRS, and geocentric coordinates, for gravity (e.g., EGM2008), geoid, and geomagnetic field (e.g., WMM2010) calculations, and for solving geodesic problems. For documentation, visit https://geographiclib.sf.io

  • SDIF

    The Sound Description Interchange Format (SDIF) is an established standard for the interchange of sound descriptions and analysis data. This project provides libraries, SDIF (in C) and Easdif (in C++), tools, and wrappers to read and write SDIF files.

    Downloads: 13 This Week Last Update: See Project
  • Spinal Cord Toolbox Icon

    Spinal Cord Toolbox

    Toolbox for processing spinal cord MRI data

    The Spinal Cord Toolbox is a comprehensive and open-source library of analysis tools for multi-parametric MRI of the spinal cord. List of contributors can be found here: https://sourceforge.net/p/spinalcordtoolbox/wiki/Home/

  • Biosignal Tools

    BioSig is a software library for processing of biomedical signals (EEG, ECG, etc.) with Matlab, Octave, C/C++ and Python. A standalone signal viewer supporting more than 30 different data formats is also provided.

  • GetData

    The GetData library provides an API to interface with Dirfile databases. The Dirfile database format is designed to provide a fast, simple, scalable format for storing and reading binary, synchronously-sampled, time-ordered data.

  • PROPER Optical Propagation Library

    Routines for wavefront propagation in IDL, Matlab, and Python

    PROPER is a library of routines for the propagation of wavefronts through an optical system using Fourier-based methods. It was developed at the Jet Propulsion Laboratory for modeling stellar coronagraphs, but it can be applied to other optical systems were diffraction propagation is of concern. It is currently available for IDL (Interactive Data Language), Matlab and Python (2.7 & 3.x). It includes routines for generating complex apertures and obscurations and aberrations (Zernike & PSD-defined). It includes a model of a deformable mirror for wavefront control. The routines perform near and far field propagation with automatic selection of propagators. The latest version is v3.0a. released on 24 Jan 2018.

    Downloads: 36 This Week Last Update: See Project
  • DCT

    Diffraction Contrast Tomography analysis code

    Diffraction contrast tomography code base, as developed by researchers from beamline ID19 of the ESRF, Grenoble, France, and Manchester University, UK.

    Downloads: 1 This Week Last Update: See Project
  • Quantum Information Toolkit

    Quantum Information Toolkit is a comprehensive, easy-to-use interactive numerical toolkit for quantum information and computing, available for both MATLAB and Python.

  • ctrax Icon

    ctrax

    Ctrax is a machine vision program for estimating the positions and orientations of many walking fruit flies, maintaining their individual identities over long periods of time with minimal supervision, and on average for 1.5 fly-hours automatically.

    Downloads: 63 This Week Last Update: See Project
  • Microarray Integrator (MAI)

    Microarray Integrator for heterogeneous human/mouse Affymetrix arrays

    The Microarray Integrator is freely available programs to integrate heterogeneous Affymetrix microarrays for human and mouse. The cell-type-specific genes or condition-specific genes can be screened in the integrated microarrays by MAI result.

    Downloads: 2 This Week Last Update: See Project
  • DQ Robotics Icon

    DQ Robotics

    DQ Robotics is an open-source (LGPLv3) standalone open-source Robotics library. It provides dual quaternion algebra, kinematic calculation algorithms in Python, MATLAB and C++ that can be applied in robot control. The library has a catkin package wrapper for use in ROS Indigo, and also provides a V-REP interface.

    Downloads: 0 This Week Last Update: See Project
  • SCALEXTRIC_CONTROLLER Icon

    SCALEXTRIC_CONTROLLER

    An open source controller for Scalextric community

    Open source controller for Scalextric community. Scalextric Controller is composed by a custom hand controller, used to drive the Scalextric slots cars, and Android application used to communicate with the hand controller via Bluethoot low power (BLE). This project repository contains the PCB project, the micro embedded software, the Android App and the 3D CAD design of the cricital mechanical parts.

    Downloads: 0 This Week Last Update: See Project
  • CMake BASIS Icon

    CMake BASIS

    Build system And Software Implementation Standard

    The CMake Build system And Software Implementation Standard makes it easy to create sharable software and libraries that work together. This is accomplished by combining and documenting some of the best practices and utilities available. More importantly, BASIS supplies a fully integrated suite of functionality to make the whole process seamless! Check out the web site for more information. The Git repository of this project is hosted on GitHub. Some interesting facts about this project can be found on Ohloh at https://www.ohloh.net/p/cmake-basis.

    Downloads: 0 This Week Last Update: See Project
  • Gene-Environment iNteraction Simulator 2

    A tool able to simulate gene-environment and gene-gene interactions.

    Gene-Environment iNteraction Simulator 2 (GENS2) simulates interactions among two genetic and one environmental factor and also allows for epistatic interactions. GENS2 is based on data with realistic patterns of linkage disequilibrium, and imposes no limitations either on the number of individuals to be simulated or on number of non-predisposing genetic/environmental factors to be considered. The GENS2 tool is able to simulate gene-environment and gene-gene interactions. To make the Simulator more intuitive, the input parameters are expressed as standard epidemiological quantities. GENS2 is written in Python language and takes advantage of operators and modules provided by the simuPOP simulation environment. It can be used through a graphical or a command-line interface.

  • Cantera Icon

    Cantera

    Cantera is a suite of object-oriented software tools for problems involving chemical kinetics, thermodynamics, and/or transport processes. It can be used from MATLAB, Python, C++, or Fortran.

    Downloads: 51 This Week Last Update: See Project
  • Downloads: 0 This Week Last Update: See Project
  • Locaviewer Icon

    Locaviewer

    Sistema de vídeo distribuido para Centros Infatiles

    Proyecto para la IV Edición del Desafío Tecnológico planteado en la ETSIIT de la Universidad de Granada. Nuestro grupo propone una solución para que padres puedan ver en tiempo real a sus hijos mientras se encuentran Centros Infantiles. Nuestro producto se diferencia de otros en el que el cambio de cámara es automático, realizando para ello una triangulación de los niños.

    Downloads: 0 This Week Last Update: See Project
  • Toastpp Icon

    Toastpp

    Forward and inverse modelling in optical tomography

    Toast++ is a C++ software package for modelling light transport in scattering media using the finite element method. It allows 3D reconstruction of absorption and scattering distributions inside an object from boundary measurements of light transmission, using steady state, time domain or frequency domain information. Matlab and Python bindings exist for ease of use and fast prototyping.

    Downloads: 8 This Week Last Update: See Project
  • Waterloo

    Java-based scientific graphics

    Java-based scientific graphics with support for Java, Groovy, MATLAB, Python, the R statistical environment, Scala and SciLab.

  • Libraries for electrophysiological data

    This project houses software to analyze data acquired from electrophysiology experiments. Currently, we have an Octave/MATLAB program to analyze electroneurogram traces of coupled oscillators, and a Perl library for the analysis of voltage trace data

    Downloads: 0 This Week Last Update: See Project
  • Axon Library

    Axon Library (libaxon) is an Open Source, cross-platform, C++ library for reading files in Axon Binary Format. Currently only ABF2 is supported. Additionally, project include binders for Python and Matlab.

    Downloads: 6 This Week Last Update: See Project
  • Ymap - Yeast Mapping Analysis Pipeline Icon

    Ymap - Yeast Mapping Analysis Pipeline

    Pipeline for large-scale genome changes analysis of genome datasets.

    The active use repository has migrated over to: https://github.com/darrenabbey/ymap The repository here was errantly created with some large binary files included. Attempts to extract the files from the history here have failed. A copy of the history was successfully scrubbed and then hosted at github. -------- Eukaryotic pathogens have complicated and dynamic genomes. To facilitate analysis of copy number variations (CNV), single nucleotide polymorphisms (SNPs), and loss of heterozygosity (LOH) events in Candida albicans, the most common human fungal pathogen, we developed a pipeline for analyzing diverse genome-scale datasets from microarray, deep sequencing, and restriction site associated DNA sequence experiments for clinical and laboratory strains. The YMAP pipeline automatically illustrates genome-wide information in a single intuitive figure and is readily modified for the analysis of other categories of data and other pathogen species with small genomes.

    Downloads: 0 This Week Last Update: See Project
  • uana

    UANA (Universal Abstract Numerical Algorithm) is a c++ api for developers to write algorithms independant of the underlying data container classes.

    Downloads: 0 This Week Last Update: See Project
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