PARs is a bioinformatics tool for the analysis of cis-regulatory DNA sequences. Composed of two parts: a suite of sequence analysis algorithms for predicting cis-binding sites in DNA sequences and a GUI for visualisation and exploration of the results.
Arianne is an engine to develop multiplayer online games like Stendhal
Arianne is a multiplayer online engine to develop turn based and real time games, providing a simple way of creating the game server rules and clients like our MORPG Stendhal. Our engine Marauroa uses Java and SQL for hosting hundreds of players on a solo host. Stendhal is a fun friendly and free multiplayer online adventure game with a huge and rich world. With hundreds of NPCs and different quests, features like the Travel log and achievement system keep track of progress. Thousands of creatures are ready to fight, above and below ground, and as players level up they can compare themselves on a detailed stats website. The engine Marauroa provides a simple way of creating games on a portable and robust server architecture. Marauroa manages the client server communication and provides an object orientated view of the world for game developers. It handles database access in a transparent way to store player accounts, character progress and the state of the world
Jython is a Java implementation of the Python language. It allows users to compile Python source code to Java byte codes, and run the resulting bytecodes on any Java Virtual Machine. It is the successor to JPython.
open source client management system, software deployment
opsi is a Client Management System for Windows and Linux clients based on Linux servers. opsi is used for automatic OS installation, software depolyment, hard- and software inventory, distributed software depots.
TANGO is a device oriented control system for Linux and Windows. It provides a framework in C++, Java and Python for implementing distributed control objects. TANGO has a full set of tools and hundreds of device servers.
openthinclient is an open source thin client solution
openthinclient is a free open source thin client solution consisting of a Linux based operating system along with a comprehensive Java based management GUI and server component. It is intended for environments where a medium to large number of thin clients must be supported and managed efficiently.
Open-Source Framework for Distributed Constraint Optimization (DCOP)
FRODO is a Java platform to solve Distributed Constraint Satisfaction Problems (DisCSPs) and Optimization Problems (DCOPs). It provides implementations for a variety of algorithms, including DPOP (and its variants), ADOPT, SynchBB, DSA...
Experiment Design and Administration for Computer Clusters. Latest source code on http://github.com/edacc
VNCed allows admins and teachers to monitor multiple workstations at the same time using VNC. There are a number of other VNC releated downloads available including MSI Creators/Installers for UltraVNC, Win32 version of RFBProxy and pyvnc2swf-py2exe
An e-text reader for java mobile phones.
PowerTalk automatically speaks Microsoft PowerPoint presentations. For presenters who find speaking difficult, audiences containing people with visual impairments and fun educational uses. Uses synthesised computer speech provided with Windows
Modbus slave simulator
ModbusPal is a project to develop a PC-based Modbus simulator. Its goal is to reproduce a realistic environment, with many slaves and animated register values. Almost everything in ModbusPal can be customized and controlled by scripts.
This Project moved to https://sourceforge.net/projects/synbiowave/ because the name GeneWave is a registered trademark... Please do not use this project anymore.
NetWhistler is SNMP monitoring software that offers integrated fault and performance management functionality. This Java program auto-detects networks and presents them on graphical maps, which reflect host status. Mila NNM is a pyQT fork of Netwhistler.
TANGO is an object oriented control system for Linux and Windows. It provides a framework in C++, Java and Python for implementing distributed control objects an accessing them via a well-defined API. This sourceforge project a
Scientific Computation and Visualization Environment
SCaVis is an environment for scientific computation, data analysis and data visualization for scientists, engineers and students. The program is fully multiplatform (100% Java) and integrated with Java and a number of scripting languages: Jython (Python), Groovy, JRuby, BeanShell. SCaVis can be used to plot functions and data in 2D and 3D, perform statistical tests, data mining, numeric computations, function minimization, linear algebra, solving systems of linear and differential equations. Linear, non-linear and symbolic regression are also available. Elements of symbolic computations using Octave/Matlab scripting are supported. The project was migrated to DataMelt.
This project is for particle accelerator start-to-end simulation. The project contains software infrastructure for setting up model run as service/client mode.
Java application for multiple downloads
Java application that allows you to download multiple files (concurrently) using a cluster of computers. Aplicación en JAVA que permite descargar multiples archivos de manera concurrente utilizando un conjunto de ordenadores
Wattos is a collection of mostly Java programs for Structural Biology and NMR Spectroscopy. It's programs analyze, annotate, parse, archive, and disseminate experimental NMR data deposited by authors world wide into the PDB and BMRB.
Protoreto is a GPL-licensed tool to create prototypes of graphical user interfaces (GUIs). NOTE: This project is not actively maintained at the moment. If you'd like to continue developing Protoreto, please send an e-mail to: firstname.lastname@example.org
Java-based scientific graphics
Java-based scientific graphics with support for Java, Groovy, MATLAB, Python, the R statistical environment, Scala and SciLab.
Digital Preservation Software Platform (DPSP) consists of a number of open source products such as Xena and Digital Preservation Recorder. This installs and configures the complete platform for preserving digital records - just install and use!
Image processing framework to integrate EM software packages.
Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated into Scipion and contains the algorithms in the core libraries and command line programs.
The application Bio7 is an integrated development environment for ecological modelling and contains powerful tools for model creation, scientific image analysis and statistical analysis. The application itself is based on an RCP-Eclipse-Environment (Rich-Client-Platform) which offers a huge flexibility in configuration and extensibility because of its plug-in structure and the possibility of customization.
Sadly JFCUnit is no longer supported but idea is neat and with a few more improvements it can be even more useful tool for regression testing. JFCUnit-2 will have distributed testing, SWT support, JUnit independent and lots of other improvements.