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Top Apps

  • PubNub: Realtime APIs, Global Infrastructure Icon
    PubNub: Realtime APIs, Global Infrastructure Icon

    Harness the power of PubNub’s programmable APIs and robust global network to power realtime chat, geolocation, IoT, multiplayer games, and more.

    The realtime revolution is upon us. Users want data, and they want it now. Deliver the immersive, interactive experiences your audience craves with PubNub. Get to market quickly with pre-built SDKs, integrations, and serverless computing at the edge; then scale on a global network that delivers any message in under a quarter of a second with five 9’s reliability guaranteed.
  • ManageEngine Now Lets You Patch Computers From Cloud Icon
    ManageEngine Now Lets You Patch Computers From Cloud Icon

    ManageEngine Patch Manager Plus offers patching capabilities on cloud - Patch all OS updates and 550 third party apps on-demand and stay secure!

    Last year saw the hackers unleash their expertise in skills for a ransom - targeting those unpatched computers in data-critical institutions. Only if the computers were patched on time, billions of dollars could have been saved. ManageEngine’s Patch Manager Plus comes to your rescue, offering you an automated patching solution, now on cloud, for latest hotfixes of Windows updates and a wide range of third-party applications (over 550 of them).
    Automate patching with Patch Manager Plus, sit back & relax!
    Try FREE Trial
  • sourcesinc

    Source code from the Research Institute for Signals, Systems and Computational Intelligence

    Downloads: 17 This Week Last Update: See Project
  • Java Research and Citation Assistant

    This project will hope to provide an application (using the Java coding language) that will manage facts and citations used in writing research reports. The application will have the ability to manage facts and create citations in accepted formats.

    Downloads: 0 This Week Last Update: See Project
  • gerea

    The OpenGEREA is a open enrichment analysis framework for gene expression regulation data analysis.

    Downloads: 0 This Week Last Update: See Project

    identification of sequence variant associated with splicing event

    To generate correct mature mRNAs, the exons must be identified and joined together precisely and efficiently by RNA splicing mechanism. It is to be noted that about one third or a half of all disease-causing mutations effect RNA splicing. However, there is little bioinformatics tools to directly identify sequence variants associated with splicing events (SVASE) based on RNA-seq data. We developed ISVASE, a simple and convenient tool for identifying SVASE directly using RNA-seq data. Comparing with the existing software PVAAS, our method has several advantages such as stringent rule-depended filters and statistical filters in each step, detection sequence variants for known splicing events, identification sequence variants in two parts of splicing (junction) separately, detection junction shift events if providing known splicing annotation, evaluating splicing signal, comparing with known DNA mutation and/or RNA editing data, and short running time.

    Downloads: 0 This Week Last Update: See Project
  • CG Clustering

    Biological sequence analysis module used in generating CG clusters. Useful for basic sequence manipulations, regular expression based searches, and base compositional analysis.

    Downloads: 0 This Week Last Update: See Project
  • Discover Server and Application Network Dependencies Icon
    Discover Server and Application Network Dependencies Icon

    Discover and troubleshoot application dependencies to determine if it’s an application or network problem with SolarWinds Server & Application Monitor

    Server and Application Monitor helps you discover application dependencies to help identify relationships between application servers. Drill into those connections to view the associated network performance such as latency and packet loss, and application process resource utilization metrics such as CPU and memory usage. Determine if process utilization or network performance is affecting the application and end-user performance.
  • Hyperglossary

    The HyperGlossary Project enables real-time annotations of web sites for the purpose of explaining jargon-heavy pages with pop-up definitions and other resources, such as powerpoints and videos.

    Downloads: 0 This Week Last Update: See Project
  • Blast Explorer

    Blast Explorer facilitates Blast results exploration

    Downloads: 1 This Week Last Update: See Project
  • SimBac

    SimBac is a software package for simulating bacterial genome evolution. It outputs samples of DNA sequences at each generation & allows testing of major evolutionary mechanisms, including mutation, recombination, genetic drift, and natural selection.

    Downloads: 0 This Week Last Update: See Project
  • BioInfoServ Project

    bioinformatic platform

    The ideal Operation System, BioInfoServOS, which is a specially customised system for scientists handling and analysing biological data, but also for easy use of daily official business handing, has been distributed. Offcial Website: [] (

    Downloads: 0 This Week Last Update: See Project

    Reference based genome assembly and annotation for new genome

    This program can assemble and/or annotate genome for new genome and known genome upgrade using sequence alignment file (SAM or BAM format), sequence variant file (VCF format or five coloum table (tab-delimited, including chromosome, position, id, reference allele and alternative allele)) or new genome sequence file (FASTA format) based on reference genome sequence file (FASTA format) and annotation file (TBL, GTF, GFF, GFF3 or BED format).

    Downloads: 1 This Week Last Update: See Project
  • Open source. Easy to use. Proven. Complete. Icon
    Open source. Easy to use. Proven. Complete. Icon

    End to end big data that enables you to spend less time formatting data and more time analyzing it.

    Discover HPCC Systems - the truly open source big data solution that allows you to quickly process, analyze and understand large data sets, even data stored in massive, mixed-schema data lakes. Designed by data scientists, HPCC systems is a complete integrated solution from data ingestion and data processing to data delivery. The free online introductory courses and a robust developer community allow you to get started quickly.
  • NxGview

    A virtual software pipeline that contains several PERL modules for processing next generation sequencing data

    Downloads: 0 This Week Last Update: See Project
  • Biosysplus

    Biosysplus is a software which use to generate ordinary differential equations for large scale molecular network. User just only need to provide some key reaction step and rate constant.

    Downloads: 0 This Week Last Update: See Project

    RIPCAL is a bioinformatics tool for the analysis of repeat-induced point mutation (RIP) of fungi. If you publish work using RIPCAL please cite: Hane & Oliver, BMC Bioinformatics 2008, 9:478

    Downloads: 0 This Week Last Update: See Project
  • Linux Utility Scripts

    Linux utility scripts

    A handy set of Linux utility scripts. Mount a remote Windows share, display the processes associated with a pty, distribute .rc files or ssh public key to clients, tunnel RDC or VNC through remote gateway via ssh, easy command-line access to system config tools, and more.

  • uDOS

    uDOS is a free operating system built on the FreeDOS kernel with DJGPP. uDOS provides an integrated suite of features inluding Perl, Python, etc., as well as a Watt-32 based networking environment and ELF library support. Can be run live from CD image.

    Downloads: 3 This Week Last Update: See Project
  • iCamp Codebase

    iCamp is a research and development project funded by the European Commission. The project aims at creating an infrastructure for collaboration and networking in Higher Education across systems.

    Downloads: 0 This Week Last Update: See Project
  • YZshaper

    The idea of this project is to create a php user friendly interface for traffic shaping. It lets the network administrator manage internet traffic, network services, internet protocols...The object of this project is to ensure the QOS of the network.

    Downloads: 0 This Week Last Update: See Project
  • VDJFasta Icon


    Bioinformatics Perl extension for the analysis of antibody variable domain repertoires. Suitable for mammalian repertoire sequences obtained either by Sanger or 454 sequencing. Methods published in Glanville, Zhai, Berka et al, PNAS 2009.

  • OptimizeSNP

    Selects SNPs and samples with known genotypes for microarray design

    Program apply linear programming to minimize the number of microarrays and hybridization experiments that need to be undertaken in order to cover most of the predicted expressed SNPs.Dependencies:. 1) mampl.exe must be in system PATH 2) CPLEX 12.2 must be installed. cplexamp.exe must be in system PATH mampl.exe can be obtained from any program containing AMPL. I obtained AMPL from trial version of MOSEK at CPLEX 12.0 can be obtained from A free acadamic license can be obtained by filling out IBM academic initiative application.

    Downloads: 0 This Week Last Update: See Project
  • D.U.C.K

    D.U.C.K (Determine segmentation of Unknown words by using Context Knowledge)is an NLP tool, which aims to find the correct segmentation for unknown words in written Hebrew. Statistics from different scopes will be used to determine the segmentation.

    Downloads: 0 This Week Last Update: See Project
  • CNV-WebStore

    CNV-WebStore is an integrated platform to analyse, store, visualise and interpret CopyNumber Variation data. Analysis is supported for Illumina data, all CNV-reports and raw data can be imported after third-party analysis. Contact system admin at for installation scripts

    Downloads: 0 This Week Last Update: See Project
  • ChIPOTle Peak Finder

    ChIPOTle is a peak-finding algorithm used to analyze ChIP-chip microarray data

    Downloads: 0 This Week Last Update: See Project
  • LabBook

    This software is a Perl Catalyst based electronic lab notebook (ELN) aiming for small biologic laboratories, that have no funding to invest into a closed source ELN.

    Downloads: 2 This Week Last Update: See Project
  • BLibrestez55 Robotics Software Project

    BLibrestez Robotics Software Library Project BLIBRESTEZ55ROBOTICSPROJECT/downloads/basic Copyright©2011-2020 BLibrestez55Ro

  • COALA.sys

    I often encountered an inability among users to think beyond SAP and MS. Goal of the project is to create a web based application management platform, which enables organisations to easily manage applications within the system.

    Downloads: 0 This Week Last Update: See Project
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