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Calculator for (La)TeX Using (La)TeX language (mathematics environment only) for calculations by means of python, bc, maxima, octave or/and similar programs.
ChIPOTle is a peak-finding algorithm used to analyze ChIP-chip microarray data
CollagenFinder (CF) is a software tool for searching CLP sequences in
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D.U.C.K (Determine segmentation of Unknown words by using Context Knowledge)is an NLP tool, which aims to find the correct segmentation for unknown words in written Hebrew. Statistics from different scopes will be used to determine the segmentation.
Bioinformatics software for analyzing the location of DNA motifs that induce self-catalytic depurination.
Continuation of the UCSB CS 290F class project.
DynamixCMS is a professional web site and content management solution. Development on this software is by invite only. Suggestions are open of course all the time. But other than that, this is a closed and private project.
FOCIS finds features for functional follow-up
A set of tools to process and analyze Fasta files. This project is inscribed in the field of Proteomics.
GoKo Project is a outside-school project created by students who are interested in Open-Source Community and dedicated their times and efforts with creating applications and modifications for forum software and web development.
Scripts to implement Hierarchical Annotation-Dependent Alignment (HADA) protocol for sequence alignment, and related functions.
HOPPscore is a simple application for evaluating the structural quality of theoretical or experimental protein structures. Protein are evaluated by comparing structure fragments to a reference dictionary of fragments from high resolution structures.
The HyperGlossary Project enables real-time annotations of web sites for the purpose of explaining jargon-heavy pages with pop-up definitions and other resources, such as powerpoints and videos.
identification of sequence variant associated with splicing event
Analysis for the identification of non-neutral evolution in bacterial genomes.
Project to create a set of algorithms which will identify and isolate mRNA isoforms through primer design for RT-PCR techniques.
This project will hope to provide an application (using the Java coding language) that will manage facts and citations used in writing research reports. The application will have the ability to manage facts and create citations in accepted formats.
Key Differentiator is a tool that can be used to generate "diffs" of the contents of two database tables that have a similar schema structure
LANmgmt is solution for more consistent, effective and automated network management. Multi-segment / multi-VLAN / multi-gateway / multi-IDS stackable switched ethernetworks are supported. Automatic configuration & inspecting of the ethernetwork.
Perl script for automatic distinct processing of LaTeX programmed inline drawings allows use of incompatible illustration tools in the same document and critically reduce recompilation time.
Code repository for the Laboratory for Genome Bioinformatics at Texas A&M. The LGB project was initiated primarily to support biologists at Texas A&M needing help with bioinformatics in order to use new genomic technologies.
Linux utility scripts
MMC4 user config for MUD Aladon
This is our final project for TAU. it is a perl based web software engine designated to store and manage registers fields information.