An open-source OMR application written in MATLAB, capable of processing various pen or pencil marked documents. The document form is fully customizable so that common surveying forms as well as academic omr-based exam sheets can be processed.
Extended Bioaccumulation Framework (ExBAF) is a tool for assessing bioaccumulation in foodwebs. Supports several bioaccumulation models and provides tools for analysis and visualization.
Toolboxes for SPM (http://www.fil.ion.ucl.ac.uk/spm/) developed at Freiburg Brain Imaging (http://fbi.uniklinik-freiburg.de/)
A tool based on the model proposed by Bellman & Zadeh (1970) fuzzy logic (fuzzy sets) decision support paper. The first version of the application was developed in Java (pure java + jgoodies and some other APIs). Now it is being rewritten using nebular, a pure Java fuzzy API.
Nounou is a Java library for handling optical imaging data. The core consists of a modular stream of "filter blocks" that each modify or display the data. It is easily called from Mathematica and Matlab, for advanced figure output.
This software is a java3d-based grid platform and depends on jvm and matlab.
Desarrollo de software para computo bioinspirado y bioinformatica
The Databionics ESOM Tools offer many data mining tasks using Emergent Self-Organizing Maps. Visualization, clustering, and classification of high-dimensional data using databionics principles can be performed interactively or automatically.
sigTOOL provides a user-extendable signal analysis environment for processing electrophysiological data within MATLAB. Neuron spike-train, + spectral and time-domain analyses are built in. See http://dx.doi.org/10.1016/j.jneumeth.2008.11.004
gfit creates an interface between computational models and experimental data and provides tools for their analysis
PeterHi is an initiative to provide a set of tools for education based on your existing IT infrastructure.
ReactionLab is a software package aimed for a unified computer environment to kinetic modeling of chemical reaction systems. The present implementation is founded on Matlab and Java-Swing GUI, with an interface to legacy C (and Fortran) codes.
GMTrack is a suite of programs used to simulate, visualize, and analyze Gaussian mixture based tracking algorithms for maneuvering targets in the presence of clutter.